Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq176 250 3e-61 seq559 111 2e-19 seq121 111 2e-19 seq220 82.4 9e-11 >seq176 Length=431326 Score = 250 bits (276), Expect = 3e-61 Identities = 901/1386 (65%), Gaps = 35/1386 (3%) Strand=Plus/Minus Query 111621 ATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTTTTGGAGACA 111680 ||| ||||||| || || |||| || || |||||||| ||||| | | | |||||| Sbjct 235597 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 235538 Query 111681 TACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTTCAACGCTGG 111739 || || | ||||| | ||| |||| || || | ||||| || |||| ||||| Sbjct 235537 TATAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 235479 Query 111740 TACACCA-AGACCC--CAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGATTCAAT 111796 ||| ||| || | | | | ||| || ||| | | || | ||||| || || Sbjct 235478 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 235422 Query 111797 CAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGTGGTAT 111856 |||| || |||| || |||| ||||||| ||||| ||| ||||| ||||| Sbjct 235421 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 235362 Query 111857 CGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAAATGGT 111914 || | || | || | |||| |||| || ||| || || | || ||||| || Sbjct 235361 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 235304 Query 111915 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAC 111974 ||| | ||| || | |||||||| || || | ||| ||| || || || || || Sbjct 235303 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGAC 235244 Query 111975 CAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 112028 || | ||| ||||| || | | || | || |||| |||||||| |||||||| Sbjct 235243 CAGGGTGGCAACAAGCGTC-CAGGTG--CTTTTGCCATCTACCTTGAGCCGTGGCACGCA 235187 Query 112029 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGC-CG 112087 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 235186 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 235128 Query 112088 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 112147 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 235127 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 235068 Query 112148 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206 || |||| |||| | || || || || || || ||||| || |||| | ||||| | Sbjct 235067 CACTTGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACG 235009 Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTGCCAG 112266 |||| | | || ||| || ||| |||| | || || |||||| | | Sbjct 235008 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234949 Query 112267 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGC 112326 || | | ||| | ||||||||| || | || |||||||| || ||||| | || | Sbjct 234948 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234889 Query 112327 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 112386 | ||||| |||||| |||| ||||| || || |||||| | || |||||||| | Sbjct 234888 TGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCT 234829 Query 112387 CCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 112446 | || | || || || ||| |||| | | | |||||| ||||| || || | Sbjct 234828 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATC 234769 Query 112447 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 112506 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 234768 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 234709 Query 112507 AACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATT 112566 |||| ||||| || || ||| |||||| ||||| |||| || || | || | Sbjct 234708 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 234649 Query 112567 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 112625 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 234648 ACTACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 234590 Query 112626 GTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 112684 ||| | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 234589 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 234531 Query 112685 GAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||||| | || | || |||||||| || ||||| || ||||||||||| | Sbjct 234530 CAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATG 234471 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 ||| | || ||| ||||| || || || | || ||||||| || || || Sbjct 234470 CGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGG 234411 Query 112805 GGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGACGC 112861 | ||| || | || ||||||| ||| | ||| | || || ||||||| ||| Sbjct 234410 CGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGC 234354 Query 112862 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCC 112921 ||||||| ||| || | ||| | || ||| ||| | | || || ||||| Sbjct 234353 ACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCC 234294 Query 112922 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 112981 ||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | || Sbjct 234293 AACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAA 234234 Query 112982 CATCTA 112987 ||| || Sbjct 234233 CATTTA 234228 >seq559 Length=875383 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 102183 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 102241 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 604541 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 604599 Query 102242 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 102301 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 604600 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 604659 Query 102302 TCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| | ||| ||| || || Sbjct 604660 CCGTGATGAGGGCATGCACACAGACTTCGC 604689 >seq121 Length=465529 Score = 111 bits (122), Expect = 2e-19 Identities = 221/323 (68%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 176732 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 176791 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 193832 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 193773 Query 176792 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 176850 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 193772 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 193714 Query 176851 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACA 176910 || | | ||| ||| || | ||| || || ||||| || ||||| | Sbjct 193713 ATTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGAAT 193654 Query 176911 CTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 ||| |||||||| || |||||||| | | || | || |||| | || |||| Sbjct 193653 CTTACCACGAAGTGGAAAGACACCAAACAGGTCTGGGTTGACAACAGCTCGCCCTGCAAG 193594 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGC 177030 || ||| ||||| ||||| ||||||| |||||| || |||||| || || | Sbjct 193593 AGCAAGCAAGGCGGCAGAGTCACCTTCTGTCAAGATGAGCGTGCACTTG--TGACCGTCC 193536 Query 177031 --CGTACCCGCCTTGTTCGCATC 177051 |||||| |||||||| || || Sbjct 193535 TTCGTACCGGCCTTGTTGGCGTC 193513 >seq220 Length=377434 Score = 82.4 bits (90), Expect = 9e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 16056 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 16115 ||||| | || || || ||||||||||||| |||||| || || | ||||||| Sbjct 33077 TTTCCGATAGCGTCGATTTCATCAATGAAGATGATGCACGGAGTGTTCTTGCGAGCGTTG 33018 Query 16116 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 16175 | || | || |||||||| ||| ||| |||||||||||||| || || || | | Sbjct 33017 GCGAACAAGTCTCGTACACGACTGGGGCCGACACCAACAAACATTTCAACGAACTCCGAC 32958 Query 16176 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 16234 |||| ||| | ||| ||||| || ||||| |||| || || | || Sbjct 32957 CCGGAGACA-GAAAAGAATGGGACGCCGCTCTCTCCCGCCGTGGCCTTAGCAAGTAATGT 32899 Query 16235 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 16288 |||||| || || ||| || | |||| || ||||| |||||||||||||| Sbjct 32898 CTTACCAGTTCCCGGCGGCCCTGATAGGATTGCTCCTCGAGGAATCTTGGCGCC 32845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737977210400