Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq176 156 5e-33 >seq176 Length=431326 Score = 156 bits (172), Expect = 5e-33 Identities = 1079/1719 (63%), Gaps = 55/1719 (3%) Strand=Plus/Plus Query 109509 CTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGT---CGATGATACACTTTTG 109565 ||||||||| ||||| || |||||| ||||| ||||| | ||||| ||| || | Sbjct 233984 CTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCT---G 234040 Query 109566 GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATGTT 109625 ||| || |||||||| |||||||| | ||||| || || ||||||| |||| Sbjct 234041 GCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCG 234100 Query 109626 TTGAATAGAGCCAC---CAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACC 109682 ||||| |||||| |||| | | || | | |||||| | | |||||||| || Sbjct 234101 CTGAATGGAGCCATTGTCAGCGATGA---TGCGGTTCTTCATGTTCTCTGACCAGAGGCC 234157 Query 109683 GACCTTTTTGAGATCGTCAACAAG--ATGCTTGTTGACCACGACAAATTCACCAGCAAGT 109740 | |||||| | | ||| ||| |||||| || || || ||||| | Sbjct 234158 ACGGTCGACGAGATCCTTCAGAAGCCATGG--GTTGACGACCTGGAACTCGCCAGCCAAC 234215 Query 109741 GTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATT 109800 || || ||| ||||| | ||||| || ||||| ||||| || ||| | ||| Sbjct 234216 ACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATC 234275 Query 109801 TGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTC--G 109858 || | || || ||||| ||||| || || | |||||| ||| || | ||| | | | Sbjct 234276 TGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGG 234335 Query 109859 TCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGTCTCACCAT 109918 | | | || | | | |||| |||| || | | | || ||||| || Sbjct 234336 GCGAT-CTTGCCCTTG-AGTGCGGCCCAGTCCCAGAGGTCGGTAGG---AGTCTTGCC-- 234388 Query 109919 CCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACG 109978 |||||| || || || | |||| | | ||||| || | | ||||||| | Sbjct 234389 -CCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAG 234447 Query 109979 ACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAA 110038 || ||| || | |||| |||||||||| || || |||||||| || ||||||| Sbjct 234448 GACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAA 234507 Query 110039 AAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAA----GACCACAAAGA 110094 |||| || || | | ||| ||||||| || | || | |||| Sbjct 234508 AAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGA 234567 Query 110095 ATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAG 110154 | |||| || ||||| | ||||| ||||||||||| || || | ||| Sbjct 234568 AGG----CATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTC 234623 Query 110155 CGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTC 110214 ||| || | ||| ||||| ||||| |||||| | || || || || Sbjct 234624 TTTCGTGCCTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTG 234683 Query 110215 ACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTGACA 110274 || || |||| || || ||||| | | | || || | |||| | | ||| Sbjct 234684 ACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACG 234743 Query 110275 TATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTAT 110334 || |||| ||||||| || || |||||||| |||| ||| || | | ||| Sbjct 234744 TAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTAC 234803 Query 110335 TCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGAT 110394 |||| || || || ||||| || || ||||| ||| || | |||||||| || Sbjct 234804 TCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTC 234863 Query 110395 TTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTG 110454 ||| |||| || ||||| || || ||| | || || || || || ||||| | || | Sbjct 234864 TTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCG 234923 Query 110455 AGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCG 110514 ||||| || | ||||| | || | || || | | ||||| ||| Sbjct 234924 AGAATAGCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCA 234983 Query 110515 TACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT- 110573 || ||||| |||| || || | ||||| ||||| || ||||| || || Sbjct 234984 TAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGG-GCATTC 235042 Query 110574 GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGG 110633 || ||| || | || | |||| | || || || || | || ||| || || || || Sbjct 235043 GTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 235102 Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693 |||||| | || |||| | || || |||| | ||||| | || ||||| ||| Sbjct 235103 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 235162 Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA------- 110746 || |||| || | ||||| || | |||||| || || || |||| || | Sbjct 235163 AAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACC 235222 Query 110747 TGGATCCCTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 |||| | ||| | |||| |||| ||| || ||||| ||| ||| |||| | | Sbjct 235223 TGGA-CGCTTGTTGCCACCC---TGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTA 235278 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTATTGGCA 110865 |||| || | || || | |||| || ||||| || | ||| | || | | | ||| Sbjct 235279 GCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGT-GGCC 235337 Query 110866 CGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TC 110924 | |||| ||| | ||| | ||||||||| || || ||| || ||||| || Sbjct 235338 CTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATC 235397 Query 110925 TGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGA 110984 | |||| ||| | || ||||||||||| || |||| |||| | | ||||| || Sbjct 235398 T-TGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGA 235456 Query 110985 AGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAG 111044 | | ||| | | || || || ||| |||| ||||| || | ||||| ||| || Sbjct 235457 TGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGA--AG 235514 Query 111045 ACCTT--GGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATA 111102 ||| ||||| | ||| ||||| |||| || | | |||| |||||||| Sbjct 235515 TACTTCAACGACATGTAGTTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATG 235574 Query 111103 CCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACGC 111162 || | || || ||||||| ||| | ||| || | ||| | ||| ||||||| | Sbjct 235575 CCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTG 235634 Query 111163 TGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 ||||||| ||| || ||||||| || |||||| Sbjct 235635 AGAAGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTAT 235673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588971803546000