Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq110 114 3e-20
seq221 86.0 1e-11
>seq110
Length=1833661
Score = 114 bits (126), Expect = 3e-20
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| || ||||| || || ||||| |||| ||||| | ||||| ||||||||
Sbjct 1246240 GTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTG 1246181
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||| || || || || || ||||| || || || || || ||||| || || ||
Sbjct 1246180 CTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTT 1246121
Query 195057 TTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCT 195114
|||||| || || ||||||| | | || || || || ||||| | ||||| ||
Sbjct 1246120 CGACTTGACATTGTCGATGGTGTCGCTGGAC--TCGACCTCGAGGGTGATGGTCTTGCCG 1246063
Query 195115 GTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||| || ||||| | |||||
Sbjct 1246062 GTGAGAGTCTTGACGAAGATCTGCAT 1246037
Score = 104 bits (114), Expect = 5e-17
Identities = 134/185 (72%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || |||||| ||| || || || ||||| |||| || || | || || |||
Sbjct 1246017 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 1245958
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || ||||| || || | ||||| ||||| || ||||||||||| ||||| ||
Sbjct 1245957 AGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 1245898
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || || |||||||| || || || || ||||||| |||||
Sbjct 1245897 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 1245838
Query 195112 CCTGT 195116
|| ||
Sbjct 1245837 CCGGT 1245833
>seq221
Length=1251372
Score = 86.0 bits (94), Expect = 1e-11
Identities = 89/117 (76%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||| ||| || ||||| ||||| |||| || || | ||||| |||
Sbjct 1048868 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 1048927
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| | || || ||||| || ||||| || || ||||||
Sbjct 1048928 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCT 1048984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109473497317190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |