Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq176 257 3e-63 seq559 221 2e-52 >seq176 Length=431326 Score = 257 bits (284), Expect = 3e-63 Identities = 970/1506 (64%), Gaps = 43/1506 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||||| | |||| |||||| || || | | | |||||| ||||| | | ||| | Sbjct 233975 GTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTT 234034 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | |||| || |||||| ||||||||| ||| | | |||||||| ||||| | | ||| Sbjct 234035 ACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGG 234094 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCG 212867 |||| ||| | || || || |||||| || | ||| ||||| ||| Sbjct 234095 GATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCT 234146 Query 212868 TTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926 ||||||||| | |||| | || ||| | || |||||||| | |||||| || Sbjct 234147 GACCAGAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTC 234205 Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986 || | | ||| | | ||||| ||| ||||| ||||||| || |||||| Sbjct 234206 GCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAA 234265 Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046 |||| ||||| | || |||||| ||||| || || || || || ||| | ||| Sbjct 234266 GCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCAC 234325 Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106 ||||||| | |||| || | || | ||||||||||| | | | ||| Sbjct 234326 ACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA---- 234380 Query 213107 GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166 ||| | | | |||||||| |||| | ||| | || || ||| |||| Sbjct 234381 GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 234436 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | ||| || || ||| || || |||||||| || |||| || ||||| | || Sbjct 234437 TGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATA 234496 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 |||||| ||||| |||| |||| |||| ||||||||| || || ||| ||||| Sbjct 234497 GATGGTCTCAAAAATCTGGATGTTAAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCG 234556 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 | ||| ||||||| || || | ||| || | || ||||||| ||| | | Sbjct 234557 GAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAA 234616 Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| ||| | || ||| | ||||| ||||| |||||| ||||||| |||| Sbjct 234617 GTTGCTCTTTCGTGC-CTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGT 234675 Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465 | || ||| ||||||||||||| | | || | || | | || || | | | || Sbjct 234676 TACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGA 234735 Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525 | || | ||||| || | ||||| ||||| || || ||||| | | Sbjct 234736 TGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAG 234795 Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585 | | ||||||||||||||| ||||||| || || ||||||||| || |||| | Sbjct 234796 CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCT 234855 Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645 |||| ||| |||||| | |||||||| || ||| | || | |||||||| || Sbjct 234856 GGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCT 234915 Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGG 213705 | | | | || || ||| | | | || || | ||| || || || | | Sbjct 234916 GCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCTTG 234971 Query 213706 GCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764 | | | ||| || | ||||| ||||| ||||| |||| || |||| ||| Sbjct 234972 CCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGA 235031 Query 213765 CCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATG 213824 || || || ||| ||||| || |||| |||| | | ||| | |||||| Sbjct 235032 CCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATA 235091 Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884 || || || || | ||| || ||| ||||| || | | | || ||| |||| Sbjct 235092 AAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCA 235151 Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944 ||| ||||| || || | || | | || ||| |||||||||||||| | ||||||| Sbjct 235152 TGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATG 235211 Query 213945 GCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAG 214001 ||||| || || || | |||| || |||||||| || | || ||||| || Sbjct 235212 GCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAG 235271 Query 214002 ATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCC 214060 | || || | ||||| || |||||||| ||| ||||| || || | || || ||||| Sbjct 235272 ACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAGCC 235330 Query 214061 GGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118 | |||||| | |||| |||| ||| || || || || |||| ||||||||||||| Sbjct 235331 TGTGGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATG 235388 Query 214119 GCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAG 214178 || || | | | || || ||| || | ||||||||||| | | | || |||| Sbjct 235389 GCACATATCTTGAGGGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAG 235448 Query 214179 AAGCAG 214184 |||||| Sbjct 235449 AAGCAG 235454 >seq559 Length=875383 Score = 221 bits (244), Expect = 2e-52 Identities = 565/854 (66%), Gaps = 16/854 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||| |||||||| Sbjct 604981 CTGGTATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 604922 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| | Sbjct 604921 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 604867 Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || | |||| |||||| | || ||||||| |||||||||| |||||| || | Sbjct 604866 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 604807 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || || | ||| | ||| | ||||||| ||| ||| ||||| || | Sbjct 604806 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATG 604747 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || || ||| || || ||||| ||| ||| | | || | |||| Sbjct 604746 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 604690 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| || Sbjct 604689 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 604630 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 | ||||| || | | || |||||||| || || || ||||| |||||||||||||| Sbjct 604629 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATA 604570 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || || || |||| | |||| | | ||||||||| || ||| Sbjct 604569 CCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 604510 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||||||| |||||| | ||||||||| || | || ||||| ||| Sbjct 604509 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 604450 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | | | || || || | || ||| || || | || |||| Sbjct 604449 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 604390 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | ||||| | |||| Sbjct 604389 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 604330 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | | ||| | ||| | || ||||| ||||| || ||||| || || || ||| Sbjct 604329 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 604270 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610 || || ||||| ||| | ||| || |||| || | |||| || |||||| | Sbjct 604269 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 604210 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | || || ||| || | || || | |||||||| || || || |||||| Sbjct 604209 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 604150 Query 48671 TACATGCCCCATAT 48684 ||||| |||||| Sbjct 604149 TACATTTGCCATAT 604136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931526162828800