Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq176 208 9e-49
seq559 89.7 6e-13
>seq176
Length=431326
Score = 208 bits (230), Expect = 9e-49
Identities = 889/1385 (64%), Gaps = 31/1385 (2%)
Strand=Plus/Minus
Query 75221 ATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACA 75280
||| ||||||| || || ||||||| ||||||||||||||||| | | | ||||||
Sbjct 235597 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 235538
Query 75281 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 75339
|| || | ||||| | ||| |||| || || | ||||| || |||| ||||||
Sbjct 235537 TATAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 235479
Query 75340 TACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAA 75399
||| ||| ||||| | | |||||| | | |||| ||||| ||| || |
Sbjct 235478 TACCCCACAGGCGCAGCTAGCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGA 235419
Query 75400 CGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGG 75459
|||||||| | || || | | ||||| ||||| ||| ||||| ||||||||
Sbjct 235418 TGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGG 235359
Query 75460 GATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGTCAA 75517
| || | || | | || |||| | ||| || || | || ||||| || |
Sbjct 235358 TCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGCACA 235301
Query 75518 TCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAA 75577
|| | ||| || | |||||||| || || | ||| ||| || || || || | ||
Sbjct 235300 TCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGACCAG 235241
Query 75578 GCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGAT 75631
| || ||||| ||| | | | || ||||| | || || ||||| || ||
Sbjct 235240 GGTGGCAACAAGCGTCC--AGGTG-CTTTTGCCATCTACCTTGAGCCGTGGCACGCAGAC 235184
Query 75632 ATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGAT 75691
||||| ||||| | || | || ||||| || | ||||| | ||| | |||
Sbjct 235183 GTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCGTGCGCGCGAT 235124
Query 75692 CTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAA 75751
| || | | || |||||||| || || || ||| |||| || || || ||
Sbjct 235123 TTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGGCACT 235064
Query 75752 TGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTT 75810
||| |||| | || || || || || || ||||| || || | ||||| |||||
Sbjct 235063 TGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACGAGTT 235005
Query 75811 TGAAGCCCTCTACACAAAGTATGA-AGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCG 75869
| | || ||| ||||| |||| ||| || ||| || ||| || | ||
Sbjct 235004 CAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCG-TGAGACGGTTCGTGCTC 234946
Query 75870 CCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTT 75929
| | ||| | ||||||||| | | ||||| ||||| || ||||| | || || |
Sbjct 234945 AGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGT 234886
Query 75930 ACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAA 75989
||||||| || ||| ||||| ||||| |||||| | || || ||||||||||| |
Sbjct 234885 ACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCTCTA 234826
Query 75990 ATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGG 76049
|| | ||||| || || | |||||| | | | ||||||| ||||| |||||| |||
Sbjct 234825 ATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATCTGG 234766
Query 76050 CATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAAC 76109
| || | || || || | || ||| | |||| |||||| | | ||||
Sbjct 234765 CTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGAAAC 234706
Query 76110 TTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTT 76169
|||| || |||| || | || || || || ||| ||| || | || | |
Sbjct 234705 TTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACTACT 234646
Query 76170 ATCCCGT-TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTT 76228
| || || ||| || |||||| || | || ||| |||| |||||| | |||||
Sbjct 234645 ACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGTGTC 234587
Query 76229 CAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAG 76288
| ||||| || |||| || | |||| |||| || || ||| ||||||
Sbjct 234586 AACGGTCTTGCTGATGCCTTCTTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGCCAAG 234527
Query 76289 GAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAA 76348
||| | || | || ||||| ||||| ||||| || | || ||||| || ||
Sbjct 234526 GAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGCTTCATGCGAG 234467
Query 76349 TTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGG 76406
| ||| ||||| | ||| | || ||||||| || ||||| | || || || |
Sbjct 234466 CTTGCTGAGAAGCTC--GGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCAGGGCG 234409
Query 76407 TGCTTCAGTTTGATATGTGGG--AAG-GTGAAACCAAGCTCAACTACGACTGGGATGTTC 76463
||| |||| || ||||||| ||| | ||| | || || ||||||| | |
Sbjct 234408 AGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGCCGCAC 234352
Query 76464 TCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAA 76523
|||||| ||| || | ||| | || ||| ||| | | || || |||||||
Sbjct 234351 TCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGATGCCAA 234292
Query 76524 CAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACA 76583
||||||| ||| | || ||| |||| ||| || ||||| || |||||||||| ||||
Sbjct 234291 CAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAGCAACA 234232
Query 76584 TCTAC 76588
| |||
Sbjct 234231 TTTAC 234227
>seq559
Length=875383
Score = 89.7 bits (98), Expect = 6e-13
Identities = 326/503 (65%), Gaps = 22/503 (4%)
Strand=Plus/Plus
Query 65025 GAAGGCGAAATGGGCAATGAAATGG-TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCC 65083
|||||| | ||||| || |||| ||| |||| |||| | |||||| || |
Sbjct 604486 GAAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGA-CATTCGCCCTCCGTC 604544
Query 65084 TTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTAT 65142
| |||| ||||| || ||||||||||||||||| || || || ||| ||||| |
Sbjct 604545 TCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGATC-TTTTGCTGCTATCTTC 604603
Query 65143 TGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGA 65202
||| ||||||| || ||||||||| | || || ||||| || || || || |||||
Sbjct 604604 TGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGT 604663
Query 65203 GATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTTTGCGTAATAGACCC 65262
|||||||| | ||| || || ||| || ||| | | || || | ||
Sbjct 604664 GATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAGCCG 604723
Query 65263 ACTACC--GAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCA 65320
| ||| | | | || |||| | | ||||| || ||| ||| | | ||||
Sbjct 604724 A--ACCAGGCCCTTGTGCAGAGCATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCT 604781
Query 65321 TCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACA 65380
| ||||| || ||||| || || | || |||||| ||| ||||| | ||||
Sbjct 604782 TGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACA 604841
Query 65381 TTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG--GGTGCCACCCA-----TTTGG 65433
|||| | || | ||||| || || ||||| | || | | | |
Sbjct 604842 TTGAATTCGTCGCCGATCGCCTACT-------GTTGGCACTCGGCAACAAGAAGTTCTAC 604894
Query 65434 AACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTC 65493
||||| | || || || ||||| ||||| |||||| || | || ||||||||||||
Sbjct 604895 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 604954
Query 65494 TTTGAGAAGCGAGTTGGGGACTA 65516
|| |||||||| ||||| || ||
Sbjct 604955 TTCGAGAAGCGTGTTGGCGAATA 604977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596565349441600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |