Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq176 147 6e-30 seq187 118 3e-21 seq560 96.9 1e-14 seq221 86.0 2e-11 >seq176 Length=431326 Score = 147 bits (162), Expect = 6e-30 Identities = 555/865 (64%), Gaps = 7/865 (1%) Strand=Plus/Plus Query 155640 ATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTG 155699 |||||| ||||| ||||| |||||||||||||| | |||||||||||| || | | Sbjct 234810 ATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGG 234869 Query 155700 TTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || |||||||| |||||| | || || || ||||| |||| || || ||||| Sbjct 234870 TTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATA 234929 Query 155760 TTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTC 155819 ||| | | | ||| || || | ||||||| |||||| | Sbjct 234930 GCATACCATATTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGC 234989 Query 155820 ATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGG 155879 |||||| | | || |||||||| ||| ||| |||||||| | | |||| Sbjct 234990 TCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGG 235049 Query 155880 CAAAACAGCGACCAAATTTTATTACCGATT-ACACGCTCCATAAATACATCACTCGCCCA 155938 || | || | |||| | || | | | ||||||| |||||| | ||| ||| Sbjct 235050 CACATTAGAGTCCAAGTGCCGTT-CTGTTCGACACGCTGCATAAAGAGATCGGGAATCCA 235108 Query 155939 AATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTC 155998 | ||| ||||| | || | || || || | || || ||||| || || || Sbjct 235109 GAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTC 235168 Query 155999 TAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACC---ATT 156055 | ||| | | | || | || ||||| || || || |||||| ||| | Sbjct 235169 CATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACG 235228 Query 156056 CCTCTTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAAT 156115 | | ||||||||||| || || || || ||||| || ||| |||| | |||||| || | Sbjct 235229 CTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTAC 235288 Query 156116 AATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATG 156175 || ||| ||||| ||||| || || |||| ||| | || || | | | | || || Sbjct 235289 AAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTG 235348 Query 156176 AATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATT 156235 || ||| || |||||||| || | || || || || ||| ||| | |||| Sbjct 235349 AACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATC 235408 Query 156236 GAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG 156295 | | ||||| ||||| ||||| | ||| | | | |||| || || || | Sbjct 235409 GTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGC 235468 Query 156296 TCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACAT 156355 |||| || ||||| |||| ||||| || | ||||| | || ||||| ||||| Sbjct 235469 CTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACAT 235528 Query 156356 ATAATCGTATGTCTCCTTAATCTTC-TCAAGATTAGACCCGTGAATACAGATAGAGACCC 156414 || | |||||||| | || | |||| | ||||||||| | || || || | Sbjct 235529 GTAGTTATATGTCTCGAT-CGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACAC 235587 Query 156415 TCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGCAGAAGGTATGCGC 156474 ||| ||| || || || | ||| ||| | |||||||||| |||||||||| | Sbjct 235588 GCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATC 235647 Query 156475 GTTCCAGAGTTTTAAACCCGAAATA 156499 | |||||||| || || ||||| || Sbjct 235648 GCTCCAGAGTCTTGAAGCCGAAGTA 235672 >seq187 Length=419917 Score = 118 bits (130), Expect = 3e-21 Identities = 173/241 (72%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 302563 ATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTT 302622 ||||| | ||||||| | ||| | || ||||||||| || |||||||| | || Sbjct 51128 ATCATGACTTCTTCCAAAGCCTTCACTAGACGACGCTGGATGTAACCAGTCTCTGCAGTC 51069 Query 302623 TTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCC 302682 || ||||| |||||||| ||||| ||||||||||||| || |||||||| | ||||| Sbjct 51068 TTGACAGCGGTATCAATGAGACCTTCACGACCACCCATGGCGTGGAAGAAGAACTCTTGG 51009 Query 302683 GGTCGT--AGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGT 302740 ||| || |||| | | | | ||| |||| |||||||| | | | ||||| | || Sbjct 51008 GGT-GTCAAGCCACGC-AGGTATGAGTTCTCGACGAAACCTCTAGATGCAGGCGAGTAGT 50951 Query 302741 CGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCAT 302800 || ||||| ||| || |||||| | || || ||||| | |||| |||||| || | Sbjct 50950 CGTCCTTGGGAAAATGCGGCAGGACTCGGTACTTGAAGCCGAACGGGAGACGCTTGCCTT 50891 Query 302801 C 302801 | Sbjct 50890 C 50890 >seq560 Length=51990 Score = 96.9 bits (106), Expect = 1e-14 Identities = 113/150 (75%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 || || || |||||||| |||||| || || || |||||||| ||||| ||| | || Sbjct 17694 TGAGCAATTGTCATACGCGAGGGAATGGCGTGAGGGTTGATGATAATGTCCGGTGTGAGG 17635 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAA-TGTTTCCAATAGTTCCCTTTTG 251957 || || || ||||| ||||| || | || || ||| || | |||| || ||||| || Sbjct 17634 CCGTCCGCTGTGAATGGCATGTCTTCTTG-TCGATAGGTGATACCAACGGTACCCTTCTG 17576 Query 251958 TCCGTGACGAGAACTGAACTTATCACCAAT 251987 |||||||||||| |||||||||||||| Sbjct 17575 TCCGTGACGAGATGCAAACTTATCACCAAT 17546 >seq221 Length=1251372 Score = 86.0 bits (94), Expect = 2e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 302573 CTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTG 302632 ||||||| | |||||| |||| | ||| | || |||| | ||| ||||| || |||| Sbjct 524884 CTTCCATGCCCTTGATCAAACATCTCTGCAGGTATCCAGATCGAGACGTTTTGACTGCTG 524943 Query 302633 TATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCG 302687 ||||||| ||||| | |||||| ||||||| |||||||| ||||| ||||| Sbjct 524944 TATCAATGAGACCTTCGCGACCAGCCATAGCGTGGAAGAAGTACTCTTGAGGTCG 524998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471806851132090