Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq221 116 2e-21 seq526 113 3e-20 seq110 105 4e-18 >seq221 Length=1251372 Score = 116 bits (128), Expect = 2e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | ||||||||||||||||||||| ||||| || ||| |||| |||| Sbjct 1048865 AGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1048924 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||||| || |||||||| | || | ||||||||||| Sbjct 1048925 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 1048983 >seq526 Length=1022908 Score = 113 bits (124), Expect = 3e-20 Identities = 145/198 (73%), Gaps = 8/198 (4%) Strand=Plus/Plus Query 34782 TGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGG 34841 ||| | ||||||| ||||| ||||| || ||| |||| |||| |||| |||||||| | Sbjct 770763 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 770822 Query 34842 CGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGA 34901 ||||||||| || |||||||| | || | ||||||||||| | || || |||| Sbjct 770823 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 770882 Query 34902 CGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGG 34957 | || | ||||| || | | |||||| || | || |||||||| || |||||| Sbjct 770883 C--AT--TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGG 770938 Query 34958 GTCTTTACAAAGATCTGC 34975 |||||||| ||| | ||| Sbjct 770939 GTCTTTACGAAGCTGTGC 770956 >seq110 Length=1833661 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | |||| ||||||||| ||||| |||||||| || | || | || Sbjct 1246477 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCGGCCGTC 1246418 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 1246417 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 1246358 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || ||| |||||| | |||| || | || || || | || || || Sbjct 1246357 TTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGT 1246298 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||| || ||||| ||||| || || || ||||| Sbjct 1246297 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 Score = 102 bits (112), Expect = 5e-17 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || ||||| ||||| ||||| || || | || |||| || || ||||| || || || Sbjct 1246227 TCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAA 1246168 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 ||||| || |||||||| | || | ||||||||||| | || || ||||| || Sbjct 1246167 ATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTTGAC--AT 1246110 Query 34907 GCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTT 34962 | ||||| || ||| |||||| || | ||| |||||||| || ||||| ||||| Sbjct 1246109 --TGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTT 1246052 Query 34963 TACAAAGATCTGCAT 34977 || ||||||||||| Sbjct 1246051 GACGAAGATCTGCAT 1246037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325690537452830