Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq176 246 3e-60 seq110 143 3e-29 seq526 93.3 4e-14 >seq176 Length=431326 Score = 246 bits (272), Expect = 3e-60 Identities = 1106/1729 (64%), Gaps = 35/1729 (2%) Strand=Plus/Plus Query 148061 CTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA-GTCGCTTTATCTTCATCT 148119 |||||| || || || ||||||||||| ||||| | | || || | | || |||| Sbjct 233990 CTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTTACGCTGGCTG-ATCT 234048 Query 148120 CCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGATGCGCTGCACCG 148179 ||||| | |||||||| || ||||| | || |||||| | ||||||||| | | Sbjct 234049 CCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGGGATGCGCTGAATGG 234108 Query 148180 AGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTTGAGCTCGATCA 148239 |||| || || | || | || ||| | || | | ||| | |||| | Sbjct 234109 AGCCATTGTCAGCGATGATGCGGTTCTTCATGTTCTCTGACCAGAGGCCACGGTCGACGA 234168 Query 148240 GGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCAGA- 148298 | || | | || | | || || ||||| |||||||| || | ||| || || ||| Sbjct 234169 GATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTCGCCAGCCAACACACGACG-AGAG 234227 Query 148299 TACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCGTT 148358 || | |||||| || | || || || ||||||| ||||| ||||||| ||||| Sbjct 234228 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 234287 Query 148359 GCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTTTATTTTGCGC 148418 || || ||||| ||| || || ||||||||||||| |||| | | || |||| | Sbjct 234288 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 234347 Query 148419 TTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACTGCAGA 148478 || || || |||||||||||||| | || ||| | ||||||||||||||| || Sbjct 234348 TTGAGTGCGGCCCAGTCCCAGAGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGC 234407 Query 148479 ATGCCGCGGCTA-GCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCGCCAG 148537 ||| | || | | || ||| ||| | ||| || ||| || | | || || Sbjct 234408 TCGCC-CTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACCGAGCTTCTCAGCAAG 234466 Query 148538 TTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGAGCAG 148597 ||||| ||||| || || | | || || ||||| ||| || |||| ||| Sbjct 234467 CTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTAAGCTC 234526 Query 148598 C---GCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGCC 148654 | ||| | | | | ||| | ||||| || || || || || || ||||| || Sbjct 234527 CTTGGCCTCAGGCGAG---TCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACC 234583 Query 148655 CTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCG 148713 | || || | |||||||| ||||| | |||| || || |||| | | || Sbjct 234584 GTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGC-CTCTGGTACCG 234642 Query 148714 GATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACCTTTGTAATTCTGC 148773 | |||| |||| |||||| |||||| || || || ||||| || || | | Sbjct 234643 GGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGT 234702 Query 148774 GCAG------CAATTCAAAATCGTACTTGTC-ATCTACGATGCATCGGTTCACGGCGATA 148826 | || || |||||| | | || || || | ||| | | | || || | Sbjct 234703 GAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGT-CGACGTAGGTGGGCAGAGCAAGC 234761 Query 148827 GAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCAC 148886 || || |||||||| || || ||||||||| || |||||| | |||||| | |||| Sbjct 234762 GAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCAC 234821 Query 148887 AGATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCC 148946 | ||| || ||||| ||| | ||||| || |||||||||| |||| |||||| Sbjct 234822 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 234881 Query 148947 TTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTC--CACTATGAACCGATGCA 149004 |||||||| ||| | ||| ||| || || ||||| || | || | | || | Sbjct 234882 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--A 234939 Query 149005 GGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAG--TATACAG 149062 | ||| || || || || | || | ||| || ||| |||| | ||||| Sbjct 234940 TTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCT-CTCTCATAACGCTCGTACAG 234997 Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122 | || |||| | || |||||| ||| ||||| ||||| | || |||||||| || Sbjct 234998 CTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAG 235057 Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182 | ||| ||||| | | || |||| |||||| |||||||| | |||||| ||||| Sbjct 235058 AGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTA 235117 Query 149183 CATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGCT 149242 | | |||||||| ||||| || ||| ||| |||| | | || Sbjct 235118 GAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGA-ACT 235176 Query 149243 GAAT-ATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCCCTTGCGC---TTGC 149298 | || | ||| |||||||||||||||| ||| | || | || || ||| |||| Sbjct 235177 GCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGC 235236 Query 149299 CGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCGAACCATAGGTTCAATGCCAC 149358 | |||||||| |||| || | ||||||| | ||||| | ||| ||| ||| || Sbjct 235237 CACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGT 235296 Query 149359 TGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGTTGA 149418 ||| |||||||| || || |||| ||| || | | ||||| || | | Sbjct 235297 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGTTGTGAACATGAA 235356 Query 149419 CGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGATGC 149478 || || ||||| ||| ||| ||||| || || ||| || |||||| | Sbjct 235357 GACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTATCGTAGATAC 235416 Query 149479 CCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAACGCG 149538 | || |||||||| |||||||| || || ||||| || | |||| | | Sbjct 235417 CATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 235476 Query 149539 TGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCTCGT 149598 | || || ||| | || || || ||||| || || ||| ||| | | Sbjct 235477 TACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGTTAT 235536 Query 149599 ACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCAGCA 149658 | | ||||| | | || ||||| || || || ||||| | || || ||||| | || Sbjct 235537 ATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCA 235596 Query 149659 TATGCTGCGGTCGCTCCGCCACTTTGTTTCCAATTTTGAGCAAGTAGCCGTTTTCTAGTG 149718 | || ||||||| ||| || || ||| ||||| |||| | ||| || || | Sbjct 235597 TCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGAAGGTATGATCGCTCCAGAG 235656 Query 149719 TCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCGGCCGTGGTCAATGGC 149767 ||||| |||| ||||| | ||||| ||||||||| | | | ||||||| Sbjct 235657 TCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGC 235705 >seq110 Length=1833661 Score = 143 bits (158), Expect = 3e-29 Identities = 152/198 (77%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || |||||||| || ||||| ||| || || ||| | ||||||||||||||||| Sbjct 1246233 GTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCA-TCCTCGAGCTGCTTGCC 1246175 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || ||||||||||| || ||||| || |||||||| |||||| ||| Sbjct 1246174 TGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGATCTTCGACTT 1246115 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||| ||| ||| || |||| ||||| ||| |||||||| ||||| Sbjct 1246114 GACATTGTCGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGAGT 1246055 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 1246054 CTTGACGAAGATCTGCAT 1246037 Score = 140 bits (154), Expect = 3e-28 Identities = 157/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||||||||| ||||| || ||||| || | | ||| || |||||| | Sbjct 1246470 AAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC--CGAAAGTGTCCGGCCGTCCTCAA 1246413 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 |||||||||| ||| | ||||| ||||||||||| || |||||||| |||||||| || Sbjct 1246412 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGA 1246353 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| ||||| | || | |||||||| | ||||| |||| |||| || |||| Sbjct 1246352 TCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTCTTGC 1246293 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| || || || |||||||| ||||| Sbjct 1246292 CGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 Score = 95.1 bits (104), Expect = 1e-14 Identities = 124/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || ||||| ||| || ||| ||| |||||||||||| ||||| || Sbjct 1246000 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACC-GTCCTCGAGCTGTTTGCCTGCAA 1245942 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 |||| | || |||||||| || || |||||||||||||| |||||| ||| | | Sbjct 1245941 AAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGGATCTTGCTCTTCACAT 1245882 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | ||||||| | ||| || |||| ||| | ||| |||||||| Sbjct 1245881 TGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTGCCGGT 1245833 >seq526 Length=1022908 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 133465 TGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCC 133523 || || | ||||| || ||||| ||| | ||| ||| | ||||| | |||||| || Sbjct 770763 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCCTCCAACTGCTTTCCA 770821 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | ||||||||||| || ||||| || |||||||| |||||| |||| Sbjct 770822 GCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTG 770881 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||| | | ||| || |||| |||| ||| ||||| || || || Sbjct 770882 ACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTC 770941 Query 133644 TTTACGAA 133651 |||||||| Sbjct 770942 TTTACGAA 770949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483417355626800