Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq110 102 5e-17
seq526 96.9 2e-15
>seq110
Length=1833661
Score = 102 bits (112), Expect = 5e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | |||||| || ||||| ||||| || |||||||| |||||
Sbjct 1246264 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 1246205
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || || | || || || |||||||||| |||||||| || | ||
Sbjct 1246204 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 1246145
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| || ||| || | ||| ||| | ||||||||| || || |
Sbjct 1246144 GATACCCTCCTTGTCCTGGATCTTCGACTTGA-CATTGTCGATGGTGTCGCTGGACTCGA 1246086
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || | || || || ||||||||||||
Sbjct 1246085 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATA 1246036
Score = 91.5 bits (100), Expect = 1e-13
Identities = 101/135 (75%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | | ||| | || | ||| ||||||||||| || || |||||||| |||||
Sbjct 1246036 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1245977
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| |||| || | ||||| || ||||||||||| || ||||| || | ||
Sbjct 1245976 CAGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGG 1245917
Query 33642 CACACCTTCTTTGTC 33656
| ||||| |||||
Sbjct 1245916 AATGCCTTCCTTGTC 1245902
>seq526
Length=1022908
Score = 96.9 bits (106), Expect = 2e-15
Identities = 143/199 (72%), Gaps = 4/199 (2%)
Strand=Plus/Plus
Query 33551 GAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTC 33610
|| ||| | | || || |||||||| |||||||| ||||| | || ||||| || ||||
Sbjct 770760 GAATGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 770819
Query 33611 CGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT-CGGCAATTTTCTGT 33669
| || || |||||||||||||| || | || | || || |||| | | | || || |
Sbjct 770820 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 770879
Query 33670 TTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAA 33728
| |||| ||| | ||||||||| || || || || | |||||| || || || || |
Sbjct 770880 T--GACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAG 770937
Query 33729 CGTTTTTACAAAGATCTGC 33747
|| ||||| ||| | |||
Sbjct 770938 GGTCTTTACGAAGCTGTGC 770956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328701716534400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |