Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq110 102 5e-17 seq526 96.9 2e-15 >seq110 Length=1833661 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | |||||| || ||||| ||||| || |||||||| ||||| Sbjct 1246264 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 1246205 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | || || || |||||||||| |||||||| || | || Sbjct 1246204 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 1246145 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| || ||| || | ||| ||| | ||||||||| || || | Sbjct 1246144 GATACCCTCCTTGTCCTGGATCTTCGACTTGA-CATTGTCGATGGTGTCGCTGGACTCGA 1246086 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || || |||||||||||| Sbjct 1246085 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCATA 1246036 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| ||||||||||| || || |||||||| ||||| Sbjct 1246036 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1245977 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| |||| || | ||||| || ||||||||||| || ||||| || | || Sbjct 1245976 CAGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGG 1245917 Query 33642 CACACCTTCTTTGTC 33656 | ||||| ||||| Sbjct 1245916 AATGCCTTCCTTGTC 1245902 >seq526 Length=1022908 Score = 96.9 bits (106), Expect = 2e-15 Identities = 143/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 33551 GAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTC 33610 || ||| | | || || |||||||| |||||||| ||||| | || ||||| || |||| Sbjct 770760 GAATGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTC 770819 Query 33611 CGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT-CGGCAATTTTCTGT 33669 | || || |||||||||||||| || | || | || || |||| | | | || || | Sbjct 770820 CAGCGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCT 770879 Query 33670 TTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAA 33728 | |||| ||| | ||||||||| || || || || | |||||| || || || || | Sbjct 770880 T--GACATTGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAG 770937 Query 33729 CGTTTTTACAAAGATCTGC 33747 || ||||| ||| | ||| Sbjct 770938 GGTCTTTACGAAGCTGTGC 770956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328701716534400