Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq559 174 2e-37 seq176 95.1 2e-13 >seq559 Length=875383 Score = 174 bits (192), Expect = 2e-37 Identities = 357/515 (69%), Gaps = 28/515 (5%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || | Sbjct 604135 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 604193 Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888 | | || | | ||||| ||| || | | ||||||||| || |||| Sbjct 604194 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 604250 Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948 || ||||||||||| || || |||||| ||||||||| || ||||||||| | | Sbjct 604251 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 604309 Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008 | ||||| | ||||| || | || |||||||| | || ||||| ||||||||| Sbjct 604310 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 604369 Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068 || || ||||||||||| || || || || || || ||||| || ||| ||| || Sbjct 604370 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 604429 Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || || || || | |||| || |||||||||| | || | | | | Sbjct 604430 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 604486 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 ||||| ||||||||| || ||||| ||||| | ||||||| || ||| | Sbjct 604487 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 604541 Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240 | ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || ||| Sbjct 604542 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 604600 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || ||||| ||||| || || |||||| |||| || Sbjct 604601 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 604635 Score = 145 bits (160), Expect = 1e-28 Identities = 322/483 (67%), Gaps = 0/483 (0%) Strand=Plus/Minus Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906 ||| ||| |||| ||||| ||| | |||||| ||| || || || || || | || Sbjct 807580 CGACTTGCCCGTCGGTGAGTCGCGCGTAGCGCAAGATTGCGCAGCGCGATTGGAGAGGCT 807521 Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966 |||||| | ||| ||||||||| | ||| || || ||||| || | | ||| Sbjct 807520 CGATGATTTTGTTCGATTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 807461 Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026 |||| || || || ||||| || || | | || | || || || ||||| || | Sbjct 807460 CCATCGTTCGGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAGAA 807401 Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086 | | ||||| || |||||| || || ||| ||||| ||| | |||||| Sbjct 807400 TTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATGC 807341 Query 333087 TCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGT 333146 || || |||||||| | ||||||||||| || |||||||||||||| ||||| || | Sbjct 807340 GGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCTT 807281 Query 333147 CGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGC 333206 | ||| | || ||||| |||||| ||||| || ||||| ||||| | | Sbjct 807280 TGTAGGCTGGGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTC 807221 Query 333207 CGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGT 333266 ||||| |||| | | | || ||||||||||| || ||| | |||||| Sbjct 807220 CGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGGC 807161 Query 333267 AGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGA 333326 | | || | ||||||||| ||||||||||| | | |||||||||||||||| Sbjct 807160 GTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCGA 807101 Query 333327 TCC 333329 || Sbjct 807100 CCC 807098 Score = 95.1 bits (104), Expect = 2e-13 Identities = 176/253 (70%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| |||||||||| ||||||| | ||||| | | || | || || | Sbjct 604745 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 604804 Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642 || | || |||||||| | ||||||| || ||||||||||| |||||||| |||| Sbjct 604805 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 604862 Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702 | || ||| |||||| | ||||| |||| | ||||||| ||| | ||| Sbjct 604863 TACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 604921 Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761 ||| || ||||| | |||||||||||||| |||||| || | |||||| ||| Sbjct 604922 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAATACCAG 604981 Query 1456762 AAGGCCGGCGTCA 1456774 ||||| || |||| Sbjct 604982 AAGGCTGGTGTCA 604994 >seq176 Length=431326 Score = 95.1 bits (104), Expect = 2e-13 Identities = 138/190 (73%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930 || || ||||||||||| |||||| || | | ||| | |||| || ||||||||| Sbjct 234374 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 234316 Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990 || | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | |||| Sbjct 234315 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 234256 Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 ||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| || Sbjct 234255 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 234197 Query 263050 GTGGTCAACC 263059 || ||||||| Sbjct 234196 GTCGTCAACC 234187 Score = 89.7 bits (98), Expect = 7e-12 Identities = 101/133 (76%), Gaps = 2/133 (2%) Strand=Plus/Minus Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153 || |||| || ||| ||| ||| || | |||||||||||| || | ||| | |||||| Sbjct 234940 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 234881 Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212 ||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || | Sbjct 234880 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 234822 Query 262213 GTGCACCGAGATC 262225 |||||| |||||| Sbjct 234821 GTGCACTGAGATC 234809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177756222452340