Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq559 174 2e-37
seq176 95.1 2e-13
>seq559
Length=875383
Score = 174 bits (192), Expect = 2e-37
Identities = 357/515 (69%), Gaps = 28/515 (5%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||||||| |||||||| ||||||||||||||||| || ||||| || |||||| | || |
Sbjct 604135 GATATGGCAAATGTAC-AAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATC 604193
Query 1455835 TCGGCGCCGACACGGTCCAC---TGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCA 1455888
| | || | | ||||| ||| || | | ||||||||| || ||||
Sbjct 604194 T-GTCGAAGGATC--TCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCA 604250
Query 1455889 TCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCC 1455948
|| ||||||||||| || || |||||| ||||||||| || ||||||||| | |
Sbjct 604251 TCTCACACGTCCTCGCATTCTT-CGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTC 604309
Query 1455949 GGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATC 1456008
| ||||| | ||||| || | || |||||||| | || ||||| |||||||||
Sbjct 604310 GAGCGCTTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATC 604369
Query 1456009 GCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGAC 1456068
|| || ||||||||||| || || || || || || ||||| || ||| ||| ||
Sbjct 604370 ATGATGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAG 604429
Query 1456069 CCGGTCGAGAAG-GACC--ACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125
|| || || || | |||| || |||||||||| | || | | | |
Sbjct 604430 CC---AAAGCAGCGAACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGG 604486
Query 1456126 AAGGCCGACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182
||||| ||||||||| || ||||| ||||| | ||||||| || ||| |
Sbjct 604487 AAGGCTGACTGGGCGTTGCGATGGATTTCTGACAAGAA----CTCGACA-TTCGCCCTCC 604541
Query 1456183 GGCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGC-GCCATC 1456240
| ||| | | ||||||| ||| ||||| ||||| ||||| || | || ||| || |||
Sbjct 604542 GTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGG-ATCTTTTGCTGCTATC 604600
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| ||||| ||||| || || |||||| |||| ||
Sbjct 604601 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCT 604635
Score = 145 bits (160), Expect = 1e-28
Identities = 322/483 (67%), Gaps = 0/483 (0%)
Strand=Plus/Minus
Query 332847 CGATTTGGGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCT 332906
||| ||| |||| ||||| ||| | |||||| ||| || || || || || | ||
Sbjct 807580 CGACTTGCCCGTCGGTGAGTCGCGCGTAGCGCAAGATTGCGCAGCGCGATTGGAGAGGCT 807521
Query 332907 CGATGACCATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTT 332966
|||||| | ||| ||||||||| | ||| || || ||||| || | | |||
Sbjct 807520 CGATGATTTTGTTCGATTGGTTGCAGGCGAAGGCGAAGCGGGTCGTGCTGCTGTAGATTT 807461
Query 332967 CCATGGTCGACCGGAGGGCCTGTTGGGCCGCCGGCGTGAGGCAGTCGGCCTCGTCGAGGA 333026
|||| || || || ||||| || || | | || | || || || ||||| || |
Sbjct 807460 CCATCGTTCGGCGCAGTGCCTGCTGCGCTCCTGAAGTCATGCTATCTGCTTCGTCTAGAA 807401
Query 333027 TGATGATCTTGTGGCGCCCGTGCGGCAGATCAACCCTTTTCGAGGCGTGGTGTTTGATGA 333086
| | ||||| || |||||| || || ||| ||||| ||| | ||||||
Sbjct 807400 TTACAATCTTCTGCCGCCCGGCGGGGAGTGTGACCTTTTTCTGCGCGAAGCCCTTGATGC 807341
Query 333087 TCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACGGCCTCGT 333146
|| || |||||||| | ||||||||||| || |||||||||||||| ||||| || |
Sbjct 807340 GGTTTCGTACGACGTCGATTCCGCGCTCGTCGGAGGCGTTGAGTTCGAGGACGGCTTCTT 807281
Query 333147 CGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTGCCCGTGC 333206
| ||| | || ||||| |||||| ||||| || ||||| ||||| | |
Sbjct 807280 TGTAGGCTGGGCCTAAGAGTTGGCGCGCGAGGCAGAGGACTGAGGTGGTTTTGCCGATTC 807221
Query 333207 CGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCCGTCGGCGGCCAGCGCCTTGAGGT 333266
||||| |||| | | | || ||||||||||| || ||| | ||||||
Sbjct 807220 CGGGCATGCCCGAGATGATTACGTGTGGCATGTTGCCATCTTTGGCGATGATTTTGAGGC 807161
Query 333267 AGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGGTACTTTTCGA 333326
| | || | ||||||||| ||||||||||| | | ||||||||||||||||
Sbjct 807160 GTTCGATGGTTTCGGTGTTGCCGACTATGTCGTCGAGGAAGACGGGGCGGTACTTTTCGA 807101
Query 333327 TCC 333329
||
Sbjct 807100 CCC 807098
Score = 95.1 bits (104), Expect = 2e-13
Identities = 176/253 (70%), Gaps = 4/253 (2%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| |||||||||| ||||||| | ||||| | | || | || || |
Sbjct 604745 ATCATCACCGAGGCCGTCACGATCGAGCAGGAGTTCTTGACAGACGCTCTTCCATGCAAG 604804
Query 1456583 CTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCGCC 1456642
|| | || |||||||| | ||||||| || ||||||||||| |||||||| ||||
Sbjct 604805 CTTCTGGGGATGAACGCTGGC-CTCATGTCACAATACATTGAATTC-GTCGCCGATCGCC 604862
Query 1456643 TGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGATG 1456702
| || ||| |||||| | ||||| |||| | ||||||| ||| | |||
Sbjct 604863 TACTGTTGGCACTCGGCAACA-AGAAGTTCTACAACGCCACCAACCCCTTCGACTTCATG 604921
Query 1456703 GAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACGCC 1456761
||| || ||||| | |||||||||||||| |||||| || | |||||| |||
Sbjct 604922 GAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTGTTGGCGAATACCAG 604981
Query 1456762 AAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 604982 AAGGCTGGTGTCA 604994
>seq176
Length=431326
Score = 95.1 bits (104), Expect = 2e-13
Identities = 138/190 (73%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 262872 CGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGAC-AGCATGGCCTGCGCAACT 262930
|| || ||||||||||| |||||| || | | ||| | |||| || |||||||||
Sbjct 234374 CGACCTCTGGGACTGGGCCGCACTCAAGG-GCAAGATCGCCCAGCACGGTGTGCGCAACT 234316
Query 262931 CGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAGG 262990
|| | ||||| |||| ||||| || ||| |||| ||||||||| ||||| | ||||
Sbjct 234315 CGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGT 234256
Query 262991 CGTTCGAGGTCAT-CACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049
||||| | ||| ||| |||||||| ||| | || || ||| | | ||||| ||
Sbjct 234255 GCTTCGA-GCCATACACAAGCAACATTTACTCTCGTCGTGTGTTGGCTGGCGAGTTCCAG 234197
Query 263050 GTGGTCAACC 263059
|| |||||||
Sbjct 234196 GTCGTCAACC 234187
Score = 89.7 bits (98), Expect = 7e-12
Identities = 101/133 (76%), Gaps = 2/133 (2%)
Strand=Plus/Minus
Query 262094 ATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAG 262153
|| |||| || ||| ||| ||| || | |||||||||||| || | ||| | ||||||
Sbjct 234940 ATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAG 234881
Query 262154 GACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAACCT 262212
||||||| ||||| | ||||||||| |||| || ||||||| | |||| | || |
Sbjct 234880 GACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCA-AGAGCTCTAATTT 234822
Query 262213 GTGCACCGAGATC 262225
|||||| ||||||
Sbjct 234821 GTGCACTGAGATC 234809
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177756222452340
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |