Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq110 104 2e-17 seq526 102 7e-17 seq221 89.7 5e-13 >seq110 Length=1833661 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||| || | || || || || |||||||| |||| | Sbjct 1246263 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 1246204 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || |||||||| || ||||| |||| ||||||||||| | || Sbjct 1246203 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 1246144 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | |||||||||| |||||| ||| | | | | | |||||||| || || ||| Sbjct 1246143 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 1246084 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | ||| || || || |||||||| Sbjct 1246083 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || ||||| | | || |||||| || | || |||||| || |||||||| || | Sbjct 1246491 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1246432 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || |||| || |||||||| || || || || | ||||||||||||| || Sbjct 1246431 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 1246372 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCAC 35688 | || ||||||||| ||||||| ||| | |||| | | ||||||| |||||||| Sbjct 1246371 ATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGATTCCAC 1246313 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || || || || | || || || || || ||||| Sbjct 1246312 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 >seq526 Length=1022908 Score = 102 bits (112), Expect = 7e-17 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 35547 CCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATA 35606 |||| || |||||||| |||| | ||| || | || |||| |||||| || || || | Sbjct 770769 CCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 770828 Query 35607 TCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG 35666 |||| ||||||||||||| || | | |||||||||| |||||| ||| | | | Sbjct 770829 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 770888 Query 35667 CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGT 35712 | | ||||||||||| || ||||| | |||||| || || || || Sbjct 770889 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGT 770934 >seq221 Length=1251372 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| ||||||||||| |||| | ||| || | || || |||||||| || Sbjct 1048880 GTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGCTTGCCG 1048939 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 || || ||||| ||||||||||||| |||| | ||||||||| Sbjct 1048940 GCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTC 1048983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450790388095600