Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq176 279 6e-70 seq559 111 2e-19 seq121 95.1 1e-14 seq220 82.4 9e-11 >seq176 Length=431326 Score = 279 bits (308), Expect = 6e-70 Identities = 909/1389 (65%), Gaps = 41/1389 (3%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| ||||| |||| ||||| |||||||||||||| | | | |||||| Sbjct 235597 ATGATCATGCGTGTGGCTGTCGGCATTCACGGGGAAGACATTGAAGCAGCGATCGAGACA 235538 Query 104291 TACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 || || | ||||| | ||| |||| || || | ||||| || |||| |||||| Sbjct 235537 TATAACTACATGTCGTTGAAGTAC-TTCACACATGCTTCGCCAACACTTTTCAGTGCTGG 235479 Query 104350 TACACCA-AGACCC--CAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAAT 104406 ||| ||| || | | | | ||| |||||| | | |||| ||||| ||| || Sbjct 235478 TACCCCACAGGCGCAGCTAGCATCC---TGCTTCTTGGTGGCCATGAAGGATGACAGCAT 235422 Query 104407 CAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTAT 104466 | |||||||| | || || | | ||||| ||||| ||| ||||| ||||| Sbjct 235421 TGATGGTATCTACGATACCCTCAAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTAT 235362 Query 104467 TGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTA--TTCGGGGGACAAATGGT 104524 ||| | || | || | | || |||| | ||| || || | || ||||| || Sbjct 235361 TGGTCTTCATGTTCACAACATCAGGGCCAC--AGGCTCATACATTGGCGGCACAAACGGC 235304 Query 104525 CAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAAT 104584 ||| | ||| || | |||||||| || || | ||| ||| || || || || | Sbjct 235303 ACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTGCACGTTACGTTGAC 235244 Query 104585 CAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCG 104638 || | ||| ||||| | || || | || |||| |||||||| |||||||| Sbjct 235243 CAGGGTGGCAACAAGCGTCCA---GGTGCTTTTGCCATCTACCTTGAGCCGTGGCACGCA 235187 Query 104639 GATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC-CG 104697 || ||||| ||||| | || | || ||||| || | || || | || ||| || Sbjct 235186 GACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCG 235128 Query 104698 CGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGG 104757 |||| | |||| ||||||||||||||| |||||||| ||| || | || || ||| || Sbjct 235127 CGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACAGAACGG 235068 Query 104758 CAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGTGGGTGAGG 104816 || |||| |||| | || || || || || |||||||| || |||| | ||||| | Sbjct 235067 CACTTGGACTCTAATGTGCCCCAACGAATGC-CCTGGTCTGTCGGATGTCTACGGTGACG 235009 Query 104817 AGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCAG 104876 |||| | | || ||| || ||| |||||| || || |||||| | | Sbjct 235008 AGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGTTCGTG 234949 Query 104877 CTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGC 104936 || | | ||| | ||||||||| || | || |||||||| || ||||| | ||| | Sbjct 234948 CTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTC 234889 Query 104937 TTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTT 104996 | ||||| |||||| |||| ||||| || || |||||| | || |||||||| | Sbjct 234888 TGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAAGAGCT 234829 Query 104997 CCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACC 105056 | ||| | || || || ||| |||| | | | |||||| ||||| || || | Sbjct 234828 CTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTCTGCAATC 234769 Query 105057 TCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAA 105116 | || || | ||||| |||| || || || |||| || ||||| | | | Sbjct 234768 TGGCTTCGCTTGCTCTGCCCACCTACGTCGACATCGAGAACGAGGTTTTTGACTTCAAGA 234709 Query 105117 AACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATT 105176 |||| ||||| || || ||| ||||| ||||| |||| || || | || | Sbjct 234708 AACTTCACGAGGTCACCAAAGTGGTCACACGTAACCTGAACAAGACCATCGAGATCAACT 234649 Query 105177 TTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGT 105235 ||||| || ||| || || || || | | ||||| || |||||||| ||| Sbjct 234648 ACTACCCGGTACCAGA-GGCACGAAAGAGCAACTTCCGCCACCGACCCATTGGTCTTGGT 234590 Query 105236 GTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACG-CATTTGATTCCGACGAAGC 105294 || | ||||| || |||| ||| || | || || | |||| || || || || Sbjct 234589 GTCAACGGTCTTGCTGATGCCTTC-TTGGCTCTCCGCATGCCATTCGACTCGCCTGAGGC 234531 Query 105295 GAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTC 105354 ||||| | || | || ||||||||||| ||||| || ||||||||||| ||| Sbjct 234530 CAAGGAGCTTAACATCCAGATTTTTGAGACCATCTATCATGCTGCTCTTGAGGC---TTC 234474 Query 105355 A---GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACA 105411 | ||| | || ||| ||||| || || || | || ||||||| || || Sbjct 234473 ATGCGAGCTTGCTGAGAAGCTCGGTCCTTACGAGACATACCCAGGCTCTCCAGTATCGCA 234414 Query 105412 AGGGGTGCTTCAATTTGATATGTGGG--AAG-GTGAGACCAAGCTTCACTACGACTGGGA 105468 || | ||| || | || ||||||| ||| | ||| | || || ||||||| Sbjct 234413 GGGCGAGCTCCAGTACGACATGTGGGGCAAGACTCCTACCGACCT---CTGGGACTGGGC 234357 Query 105469 AGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAAT 105528 || ||||||| ||| || | ||| | || ||| || ||| | || || || Sbjct 234356 CGCACTCAAGGGCAAGATCGCCCAGCACGGTGTGCGCAACTCGCTTCTCGTTGCGCCGAT 234297 Query 105529 GCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGAC 105588 |||||||||||| ||| | || ||| |||| ||| || ||||| || || ||||| | Sbjct 234296 GCCAACAGCCTCGACCTCGCAGATCATGGGCTTTAACGAGTGCTTCGAGCCATACACAAG 234237 Query 105589 GAACATCTA 105597 ||||| || Sbjct 234236 CAACATTTA 234228 >seq559 Length=875383 Score = 111 bits (122), Expect = 2e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 94807 CGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGC-GCTAT 94865 || ||| | |||||||| ||||||||||||||||||||||| | ||| ||| ||||| Sbjct 604541 CGTCTCATTGCATTTGCCGCCGTTGAGGGTATCTTCTTCTCTGGAT-CTTTTGCTGCTAT 604599 Query 94866 TTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTC 94925 | ||||| ||||| || ||||||||| | || ||| ||||| |||||||| ||||| Sbjct 604600 CTTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTC 604659 Query 94926 TCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||| ||||| | ||| ||| || || Sbjct 604660 CCGTGATGAGGGCATGCACACAGACTTCGC 604689 >seq121 Length=465529 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 169169 AGACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATAC 169228 |||||||||||||| || || |||| ||| ||| ||||||||||| ||| | ||||| Sbjct 193832 AGACCCTTGATGTGAGAGCCATCGTGATCCTGATCGGTCATGATCATCAGATGGCCATAA 193773 Query 169229 CG-AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAG 169287 || |||| | | |||| |||||||| ||||| |||||||| | |||||||| Sbjct 193772 CGCAAGC-CTTTAGTATCTGTGTAGTCCTTCTTATGTTGCAGACCCAAAAACTTCTTGAT 193714 Query 169288 ATCGTTGAACTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCGCGAACATTCTTACA 169347 || | | ||| ||| || | ||| || || |||||||| ||||| | Sbjct 193713 ATTCTGAATCTCGGCGTTCTTTGAAATCTGGTCGATGGAAGCATCGCGCACATTGAGAAT 193654 Query 169348 CTTCCCACGAAGAGGGAAGACACC 169371 ||| |||||||| || |||||||| Sbjct 193653 CTTACCACGAAGTGGAAAGACACC 193630 >seq220 Length=377434 Score = 82.4 bits (90), Expect = 9e-11 Identities = 160/234 (68%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 9695 TTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACT 9754 ||||| | || || || ||||||||||||| |||||| || || | ||||||| Sbjct 33077 TTTCCGATAGCGTCGATTTCATCAATGAAGATGATGCACGGAGTGTTCTTGCGAGCGTTG 33018 Query 9755 TCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCG 9814 | || | || |||||||| ||| ||| |||||||||||||| || || || | | Sbjct 33017 GCGAACAAGTCTCGTACACGACTGGGGCCGACACCAACAAACATTTCAACGAACTCCGAC 32958 Query 9815 GCGGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGT 9873 |||| ||| | ||| ||||| || ||||| |||| || || | || Sbjct 32957 CCGGAGACA-GAAAAGAATGGGACGCCGCTCTCTCCCGCCGTGGCCTTAGCAAGTAATGT 32899 Query 9874 CTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||||| || || ||| || | |||| || ||||| |||||||||||||| Sbjct 32898 CTTACCAGTTCCCGGCGGCCCTGATAGGATTGCTCCTCGAGGAATCTTGGCGCC 32845 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583256644266800