Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq176 226 3e-54
seq121 109 6e-19
>seq176
Length=431326
Score = 226 bits (250), Expect = 3e-54
Identities = 477/698 (68%), Gaps = 24/698 (3%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| || || || ||||||| || |||| |||||||| || | ||| |
Sbjct 235519 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 235460
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
| ||||||| ||||||| |||||||||||| || || || |||||||| || |||
Sbjct 235459 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 235400
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445
||| |||||| ||||||||| | || ||||| ||| | || || || ||| |
Sbjct 235399 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 235341
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
| | || | ||| || || || || |||||| || | || | || || ||
Sbjct 235340 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 235281
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564
||| || |||| ||||||||| || || ||||| |||||||||| ||||| | |||
Sbjct 235280 GCTACGAGTCTACAACAACACTGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 235221
Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624
| | || ||||||||||| |||||||||||||| ||| | ||| |||| | || || |
Sbjct 235220 TG-CTTTTGCCATCTACCTTGAGCCGTGGCACGCAGACGTCATGCAGTTCATGGACCTTC 235162
Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682
| ||| || || | ||||| | || ||| || || |||| ||| ||||| |||||
Sbjct 235161 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 235104
Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741
||| || ||||| ||||| || || || ||| | | | | || || |||||||| |
Sbjct 235103 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTAATGTGCCCCA 235045
Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801
|||| ||||| || || || |||||||||||| ||||| || ||| |||| || |||
Sbjct 235044 ACGAATGCCCTGGTCTGTCGGATGTCTACGGTGACGAGTTCAAGGAGCTGTA-CGAGCGT 234986
Query 53802 -------ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGAT 53854
| || ||||||| ||| ||| || | | ||||| ||
Sbjct 234985 TATGAGAGAGAAGGCAAGGGCCG------TGAGACGGTTCGTGCTCAGAAAATATGGTAT 234932
Query 53855 GCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTC 53914
|| || ||| || ||| ||||| || || || | ||| |||||||| | | |
Sbjct 234931 GCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAGGACGCCGCC 234872
Query 53915 AACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952
||| ||||||||||||||||| | ||| ||||||
Sbjct 234871 AACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAA 234834
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||||| || ||||| ||||| |||||||| || ||||| | ||||||||||||
Sbjct 234322 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 234263
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579
|||||| |||||||| ||||| | |||||| |||
Sbjct 234262 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 234227
>seq121
Length=465529
Score = 109 bits (120), Expect = 6e-19
Identities = 183/265 (69%), Gaps = 0/265 (0%)
Strand=Plus/Minus
Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211
|| |||||||| || || || || || ||||| |||||||||| || ||||| || | |
Sbjct 194738 CCGGTTCCGATGCCATCAGCGCCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 194679
Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271
|| || || | | |||||||| ||| |||| | |||| ||| | || ||| ||
Sbjct 194678 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGA 194619
Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331
| || || | | | || | || | ||| | |||||||||| || || |||
Sbjct 194618 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 194559
Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391
|| ||||| || ||||| | || || | ||||||||||| | || |||| ||||
Sbjct 194558 TCGTTGCCGCCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATATTCATGTTG 194499
Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416
|||| ||||| ||||| |||||||
Sbjct 194498 TTGGAACCCACGAAGTTCTGAGCCA 194474
Score = 98.7 bits (108), Expect = 1e-15
Identities = 279/424 (66%), Gaps = 10/424 (2%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
||||| |||||||| || || ||||||| ||| |||||||||| || || | || | |
Sbjct 194738 CCGGTTCCGATGCCATCAGCGCCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 194679
Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994
||||| || | | ||| ||||| || | ||| ||| | | | || | |
Sbjct 194678 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 194620
Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050
|| || ||| | ||| ||| ||| || | |||| | ||||| || | ||||
Sbjct 194619 ATGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 194564
Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110
||||||| ||||| ||| ||| || | |||||| | ||| |||||||||| || |
Sbjct 194563 CCGCATCGTTGCCGCCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATATTCA 194504
Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170
|||||||| |||||||| |||||||||| | | || || |||||| | |
Sbjct 194503 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 194444
Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230
|||||| | || || || | | | || | || |||| || | ||||||| | |
Sbjct 194443 CACCGTACGGGTATGCGGTGAGACCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 194384
Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
| || ||||||| || ||| | ||| || || || ||||| || ||||| |
Sbjct 194383 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 194324
Query 152291 CGTC 152294
||||
Sbjct 194323 CGTC 194320
Score = 87.8 bits (96), Expect = 2e-12
Identities = 90/115 (78%), Gaps = 2/115 (2%)
Strand=Plus/Minus
Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132
|||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || ||
Sbjct 192693 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 192635
Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187
||||||||| ||||||||| || | |||||| || ||||| | |||||| ||
Sbjct 192634 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 192580
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547212101086000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |