Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq176 226 3e-54 seq121 109 6e-19 >seq176 Length=431326 Score = 226 bits (250), Expect = 3e-54 Identities = 477/698 (68%), Gaps = 24/698 (3%) Strand=Plus/Minus Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326 |||||||| || || || ||||||| || |||| |||||||| || | ||| | Sbjct 235519 AAGTACTTCACACATGCTTCGCCAACACTTTTCAGTGCTGGTACCCCACAGGCGCAGCTA 235460 Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386 | ||||||| ||||||| |||||||||||| || || || |||||||| || ||| Sbjct 235459 GCATCCTGCTTCTTGGTGGCCATGAAGGATGACAGCATTGATGGTATCTACGATACCCTC 235400 Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCG-AACGT 53445 ||| |||||| ||||||||| | || ||||| ||| | || || || ||| | Sbjct 235399 AAGATATGTGCCATGATCTCCAAGAACGCTGGCGGTATTGGTCTTCA-TGTTCACAACAT 235341 Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505 | | || | ||| || || || || |||||| || | || | || || || Sbjct 235340 CAGGGCCACAGGCTCATACATTGGCGGCACAAACGGCACATCCAACGGTCTTGTACCAAT 235281 Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCG-CAAGG 53564 ||| || |||| ||||||||| || || ||||| |||||||||| ||||| | ||| Sbjct 235280 GCTACGAGTCTACAACAACACTGCACGTTACGTTGACCAGGGTGGCAACAAGCGTCCAGG 235221 Query 53565 GGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGC 53624 | | || ||||||||||| |||||||||||||| ||| | ||| |||| | || || | Sbjct 235220 TG-CTTTTGCCATCTACCTTGAGCCGTGGCACGCAGACGTCATGCAGTTCATGGACCTTC 235162 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGC-CGTGACCTGTT-TACAGCTCTGTGGAT 53682 | ||| || || | ||||| | || ||| || || |||| ||| ||||| ||||| Sbjct 235161 GCAAGAACCATGGAAAGGAAGAAGTTCG-TGCGCGCGATTTGTTCTAC-GCTCTCTGGAT 235104 Query 53683 TCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC-CTGATGTGCCCGA 53741 ||| || ||||| ||||| || || || ||| | | | | || || |||||||| | Sbjct 235103 TCCCGATCTCTTTATGCAGCGTGTCGAACAGAACG-GCACTTGGACTCTAATGTGCCCCA 235045 Query 53742 ACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGAGATGTATCGGACGT 53801 |||| ||||| || || || |||||||||||| ||||| || ||| |||| || ||| Sbjct 235044 ACGAATGCCCTGGTCTGTCGGATGTCTACGGTGACGAGTTCAAGGAGCTGTA-CGAGCGT 234986 Query 53802 -------ACGCAGTTCAGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTATGGGAT 53854 | || ||||||| ||| ||| || | | ||||| || Sbjct 234985 TATGAGAGAGAAGGCAAGGGCCG------TGAGACGGTTCGTGCTCAGAAAATATGGTAT 234932 Query 53855 GCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGATTCGGTC 53914 || || ||| || ||| ||||| || || || | ||| |||||||| | | | Sbjct 234931 GCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTTTCATTCTGTACAAGGACGCCGCC 234872 Query 53915 AACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAA 53952 ||| ||||||||||||||||| | ||| |||||| Sbjct 234871 AACCGCAAGAGCAACCAGAAGAATCTTGGCACCATCAA 234834 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 |||||||| || ||||| ||||| |||||||| || ||||| | |||||||||||| Sbjct 234322 CGCAACTCGCTTCTCGTTGCGCCGATGCCAACAGCCTCGACCTCGCAGATCATGGGCTTT 234263 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTAC 55579 |||||| |||||||| ||||| | |||||| ||| Sbjct 234262 AACGAGTGCTTCGAGCCATACACAAGCAACATTTAC 234227 >seq121 Length=465529 Score = 109 bits (120), Expect = 6e-19 Identities = 183/265 (69%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 117152 CCAGTTCCGATACCCTCTGCACCATTCATCAGAATCATCGGCACGACAGGAACGTAGAAC 117211 || |||||||| || || || || || ||||| |||||||||| || ||||| || | | Sbjct 194738 CCGGTTCCGATGCCATCAGCGCCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 194679 Query 117212 TCAGGCTCCACCTGCAGACCGTCGTCCGTGACGTACTTGAGCACCGCATTGTCACTCGGA 117271 || || || | | |||||||| ||| |||| | |||| ||| | || ||| || Sbjct 194678 TCCGGTTCGATGGTCTTGCCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTGA 194619 Query 117272 TCGAATATGTTCTTGGTCCACGGTGCTAGGCGAGTGAAAATGTAACGAGAGCTTGCAGCA 117331 | || || | | | || | || | ||| | |||||||||| || || ||| Sbjct 194618 TGAAAGATCGCCCTCGCAAGTGGAGACAGTCTCGTGTATATGTAACGAGGACTGGCCGCA 194559 Query 117332 TCCTTGCCACCAGCAAGACGCGTACCGAATTGTCCACTCGGCTCCAAGAGGTTCAGGTTG 117391 || ||||| || ||||| | || || | ||||||||||| | || |||| |||| Sbjct 194558 TCGTTGCCGCCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATATTCATGTTG 194499 Query 117392 TTGGCGCCCACAAAGTTTTGAGCCA 117416 |||| ||||| ||||| ||||||| Sbjct 194498 TTGGAACCCACGAAGTTCTGAGCCA 194474 Score = 98.7 bits (108), Expect = 1e-15 Identities = 279/424 (66%), Gaps = 10/424 (2%) Strand=Plus/Minus Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935 ||||| |||||||| || || ||||||| ||| |||||||||| || || | || | | Sbjct 194738 CCGGTTCCGATGCCATCAGCGCCGTTGATCAGGATCATCGGCAAGATTGGAACATACATC 194679 Query 151936 TCCGGCTCCACC-TGTTGACCGTCATCCATCACGTATTTCAAAACGGAATTGTCAGCCGG 151994 ||||| || | | ||| ||||| || | ||| ||| | | | || | | Sbjct 194678 TCCGGTTCGATGGTCTTG-CCGTCGTCGGTGTTGTACGTCAGCAGCGCTTCATCGCTCTG 194620 Query 151995 ATCGAATATC--CGTCG--AGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050 || || ||| | ||| ||| ||| || | |||| | ||||| || | |||| Sbjct 194619 ATGAAAGATCGCCCTCGCAAGT----GGAGACAGTCTCGTGTATATGTAACGAGGACTGG 194564 Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110 ||||||| ||||| ||| ||| || | |||||| | ||| |||||||||| || | Sbjct 194563 CCGCATCGTTGCCGCCTTGCAGACGTGATCCAAAATTGCCACTCGGCTCGAGGATATTCA 194504 Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170 |||||||| |||||||| |||||||||| | | || || |||||| | | Sbjct 194503 TGTTGTTGGAACCCACGAAGTTCTGAGCCAGACCGATGATGGTTTGCTGCAGTGATGTCT 194444 Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230 |||||| | || || || | | | || | || |||| || | ||||||| | | Sbjct 194443 CACCGTACGGGTATGCGGTGAGACCGGAGACTGAACCAGCCAGCTCCACCACCTTGACAT 194384 Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290 | || ||||||| || ||| | ||| || || || ||||| || ||||| | Sbjct 194383 CTTTCTTCAGGTTGCGGCGGAAACATGTGTACATGACTTTTCGCTGACCCGGCTTCAAGC 194324 Query 152291 CGTC 152294 |||| Sbjct 194323 CGTC 194320 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/115 (78%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 119074 ACTGAACACGTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTG-CT 119132 |||| | | ||||| ||||||||||||||||||||||| ||||| ||| | || || Sbjct 192693 ACTGTAGATGTTGGTAAGCTTGGCACCGTATCCGTTCCGGCCACCAGTC-GTCTTTGCCT 192635 Query 119133 CCTCGTCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||||||| ||||||||| || | |||||| || ||||| | |||||| || Sbjct 192634 CCTCGTCGTCGTAGTTGGACGAAGTAAGAAGGTGACCGAAGATCATCTCGGGAAT 192580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212101086000