Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq110 118 7e-22
seq221 98.7 6e-16
>seq110
Length=1833661
Score = 118 bits (130), Expect = 7e-22
Identities = 159/219 (73%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| |||||| || || ||| |||||| || ||||| || || |||||||| ||
Sbjct 1246482 AGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCGG 1246423
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
|||| ||||| || || ||||| || || | |||||| |||||||| || | ||||||
Sbjct 1246422 CCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCC 1246363
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||||| |||| |||| || ||| | || ||||| |||||||| | ||
Sbjct 1246362 TTGTCTTGGATC-TTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGT 1246304
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||| | || || || ||||| |||||
Sbjct 1246303 GATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265
Score = 91.5 bits (100), Expect = 9e-14
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | || | |||||||||||||||||| || ||||| || || ||
Sbjct 1246035 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 1245976
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || |||| || || ||||| || ||||| || || || || ||||| || ||
Sbjct 1245975 AGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGA 1245916
Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622
| || |||||||| ||||||
Sbjct 1245915 ATGCCTTCCTTGTCCTGGATCTT 1245893
>seq221
Length=1251372
Score = 98.7 bits (108), Expect = 6e-16
Identities = 90/114 (79%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||||||||||| |||||||| || || || || || || | || || || ||
Sbjct 1048874 TGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCGAGCTGC 1048933
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617
|| ||||| || || || ||||| |||||||| || | ||||||||||||||||
Sbjct 1048934 TTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCTGTG 1048987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314727413612810
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |