Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq559 154 2e-32 seq176 123 3e-23 >seq559 Length=875383 Score = 154 bits (170), Expect = 2e-32 Identities = 346/516 (67%), Gaps = 8/516 (2%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || |||||||| |||| ||| || |||||||| || ||||| || || || || Sbjct 604650 TCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCA 604591 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||||||||| ||||| || || || ||||| |||||||| | || | || | Sbjct 604590 AAAGATCCAGAGAAGAAGATACCCTCAACGGCGGCAAATGCAATGAGACGGAGGGCGAAT 604531 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | | | |||| ||||| || ||||| ||||||||| | | || || Sbjct 604530 GTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGG 604471 Query 48360 ATTGTTTCTATAGCATTAAAGAGAAA-GtttttttCATTGCTATCTTTAACGTAAGTATC 48418 || | || || ||||| || || | ||| | | ||| || | | ||| ||||| Sbjct 604470 ATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTTTGGC-TCGCTGATGTATGTATC 604412 Query 48419 TATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAA 48478 || | ||| ||| | |||||||| || || || || ||||| || ||||| || Sbjct 604411 GATGAGAAGGGAATATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAA 604352 Query 48479 ACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTAC 48538 |||| || || | |||||| ||||| | | || || || | | ||||| || || Sbjct 604351 GCATCGTGCCTCCGGGATCTGCACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGAC 604292 Query 48539 TATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGA 48598 || ||||| || || || ||||| | || ||| || || || ||||| | Sbjct 604291 AATGCCATCGGATGCGGCGAAGAATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTC 604232 Query 48599 AGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCA 48655 | ||| || |||||||| | || ||| || || | ||| | || ||||||||||| Sbjct 604231 GTTGAGTCGCTTGTTCCAGTCGTGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 604172 Query 48656 AAATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 ||||| ||||| || ||||| ||||| | |||||| Sbjct 604171 GAATGAGGCCTCGGCCTTTTTGTACATTTGCCATAT 604136 >seq176 Length=431326 Score = 123 bits (136), Expect = 3e-23 Identities = 588/924 (64%), Gaps = 18/924 (2%) Strand=Plus/Plus Query 77730 ATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTT 77789 || ||||| || || | |||| | ||||| ||||| ||||| | ||||||||||| Sbjct 234807 ATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTG 234866 Query 77790 TTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATA 77849 ||| | |||||| || ||||| || || || ||||| || |||| | |||| | Sbjct 234867 CGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGA 234926 Query 77850 ATAGATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTA-TCGCCTCTCTCTTTCAT 77907 |||| | ||| | ||| ||| | | | | | |||| ||||| |||| Sbjct 234927 ATAGCATACCATATTT-TCTGAGCACGAACCGTCTCACGGCCCTTGCCT-TCTCTCTCAT 234984 Query 77908 ATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCAT 77967 | | || ||| | || || || || | ||||| || ||||||||||| | Sbjct 234985 AACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGT 235044 Query 77968 TTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTA 78027 | |||||||| | | ||| || | | | || || | |||||||||||| || | Sbjct 235045 TGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAA 235104 Query 78028 TCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAA 78087 |||| ||||| || | ||| || | | | |||||| ||||| ||||| || Sbjct 235105 TCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAA 235164 Query 78088 GATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAG 78147 | || | |||| ||| | || | ||||| || || || || || || | | | || | Sbjct 235165 GGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTG 235224 Query 78148 GTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTG 78207 | || || || || ||||| || | || | || ||||| || || |||| | ||||| Sbjct 235225 GACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTG 235284 Query 78208 GAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATAT 78267 | | || |||||| ||||| || ||||| || ||| || || | || | || | Sbjct 235285 GTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGATGT 235344 Query 78268 TACTA--ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAA 78325 | | ||| | | || || || || || |||| || || | || || || | Sbjct 235345 TGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 235402 Query 78326 TGTATCGTAGATACCCTCTATACTGTCATCCATCATG----TTAAGAAGAAAACAGCTAG 78381 |||||||||||||| || || ||||||||| ||||| |||||| | ||||| Sbjct 235403 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 235462 Query 78382 ACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATT 78441 || || || || ||| | || | ||| || || ||||| || || | | Sbjct 235463 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 235518 Query 78442 TTTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCT 78500 | || | |||| || ||||| || || |||| ||| ||||| ||||| || Sbjct 235519 TCAACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCG 235577 Query 78501 ACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAAC 78560 || || |||||||| | ||| || || ||||| || | ||| || ||| | | Sbjct 235578 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGA 235637 Query 78561 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAA 78620 | ||||||| |||| ||| || || || || || | ||| ||||| | || || Sbjct 235638 AGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAG 235697 Query 78621 ATAATAACAGAATTTAGTTTATCT 78644 | ||| | || || || | |||| Sbjct 235698 ACAATGGCCGAGTTCAGCTCATCT 235721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694663850484800