Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq559 134 2e-26
seq176 116 5e-21
>seq559
Length=875383
Score = 134 bits (148), Expect = 2e-26
Identities = 546/851 (64%), Gaps = 12/851 (1%)
Strand=Plus/Minus
Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398
|| |||||||| || ||||| |||||||| || || || ||||| ||| || || ||
Sbjct 604983 TTCTGGTATTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTC 604924
Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458
||||| || || || || || || | || || | || || || | | | | |
Sbjct 604923 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT 604864
Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518
|| | ||| || |||||||| || || | ||| | || ||||| || | ||
Sbjct 604863 AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAGC 604804
Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578
||| || ||||| || || | ||||| || || || ||||| || || | || ||
Sbjct 604803 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCGATCGTGACGGCCTCGGTGATGAT- 604745
Query 46579 GATGTT-ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAA 46637
| | | || ||| | || | | ||| ||| |||| | || || ||
Sbjct 604744 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 604685
Query 46638 ATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCAT 46697
|| || | ||| ||||| | || | ||||| || ||||||||||| | |||
Sbjct 604684 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 604625
Query 46698 TAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTC 46757
|| ||||| || || ||||| || ||||| || ||||||||||| ||||| || || ||
Sbjct 604624 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATACCCTC 604565
Query 46758 TACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA---ATCCACCT 46814
|| || || ||||| | || | || | | | | || | | ||||| |
Sbjct 604564 AACGGCGGCAAATGCAATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCG 604505
Query 46815 TTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAA 46874
||||| |||||||| | | || || || | || || ||||| || || |
Sbjct 604504 CAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 604445
Query 46875 GtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATG 46934
|| | | || | | |||||||| || | ||| ||| | || || ||
Sbjct 604444 TGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTG 604385
Query 46935 AATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTC 46994
||||| || || ||||| || ||||| || |||| ||| || | ||||| |||||
Sbjct 604384 GATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC 604325
Query 46995 TGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAAAATG 47053
| | || || || ||| | ||||| || || || ||||| || || || ||||
Sbjct 604324 AGAGCTGAAGCGCTC-GACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATG 604266
Query 47054 CCAATACATGTTTAATAAAATATTTTTCATCG--GT--AGTCAGTTTATTCCAGTCATTG 47109
| | || ||| || || || ||| ||| || |||| | || |||||||| | |
Sbjct 604265 CGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTC-GCTTGTTCCAGTCGTGG 604207
Query 47110 ATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATAC 47169
| ||| || || | ||| | || ||||||||||||||||| ||||| || ||||| |||
Sbjct 604206 AGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTAC 604147
Query 47170 ATATTCCATAT 47180
|| | ||||||
Sbjct 604146 ATTTGCCATAT 604136
>seq176
Length=431326
Score = 116 bits (128), Expect = 5e-21
Identities = 613/977 (63%), Gaps = 30/977 (3%)
Strand=Plus/Plus
Query 76271 AGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATC 76330
||||| | || || ||||| || || || ||||||| | | | || | || |||
Sbjct 234753 AGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATC 234812
Query 76331 TCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTA 76390
|| ||||| | |||| | |||||| || |||||||| | ||||||||||| |||
Sbjct 234813 TCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTG 234872
Query 76391 CATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGAT 76450
| |||||| || |||| || || || || || || |||| | |||| |||||
Sbjct 234873 GCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCA 234932
Query 76451 TTCCAGACGACTCTAGCTTTTATTATA--GATTTGTATCGCTTC--------TCTCTTTC 76500
| ||| | |||| | | || || || | | ||||| ||
Sbjct 234933 TACCATA----------TTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTC 234982
Query 76501 ATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTC 76560
||| | || | | | || || || || | ||||| || |||||| |||||
Sbjct 234983 ATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTC 235042
Query 76561 ATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGG 76620
|| || ||||| | | ||| || | | | || || | |||||||||||| ||
Sbjct 235043 GTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGG 235102
Query 76621 TATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTT 76680
||||| ||||| || | ||| || | | | |||||| ||||| |||||
Sbjct 235103 AATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCG 235162
Query 76681 AAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACC 76740
||| || | ||||| ||| | || | ||||| || || || || || || | | ||||
Sbjct 235163 AAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACC 235222
Query 76741 CGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACAT 76800
|| || || || || ||||| || | || | |||||||| || || |||| | |||
Sbjct 235223 TGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCAT 235282
Query 76801 TGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAAT 76860
||| | || ||||| ||||| || ||||| || ||| || || || | ||
Sbjct 235283 TGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGTGGCCCTGAT 235342
Query 76861 ATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAA 76920
|| || | || || || || || || | || ||||| | ||||| || |
Sbjct 235343 GTTGTGAACATGAAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAG 235402
Query 76921 TGTGTCATAGATGCCCTCTATACTATCATCCATCATG----TTAAGAAGAAAACAGCTAG 76976
|| || ||||| || || || || |||||| ||||| |||||| | |||||
Sbjct 235403 GGTATCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAG 235462
Query 76977 ACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATT 77036
|| || || || ||| | || | ||| || || ||||| ||||| | |
Sbjct 235463 ----CTGCGCCTGTGGGGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACT 235518
Query 77037 TTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCT 77095
| || | |||| || ||||| || || ||||||| || || ||||| ||
Sbjct 235519 TCAACGACATGTAG-TTATATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCG 235577
Query 77096 ACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAAC 77155
||||| |||||||| | ||| || || |||| || || ||| || ||| | |
Sbjct 235578 ACAGCCACACGCATGATCATCTGTTGCGGTCTCTCGGCAACCTTGCCATCAATTCTGAGA 235637
Query 77156 AAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAA 77215
| ||||||| |||| ||| || || || || || | ||| ||||| | || ||
Sbjct 235638 AGGTATGATCGCTCCAGAGTCTTGAAGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAG 235697
Query 77216 ATAATAACCGAATTTAG 77232
| ||| |||| || ||
Sbjct 235698 ACAATGGCCGAGTTCAG 235714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712929320342400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |