Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq110 104 5e-17 >seq110 Length=1833661 Score = 104 bits (114), Expect = 5e-17 Identities = 151/210 (72%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || ||||| ||||||||||| |||| | ||| | ||||| || | Sbjct 1246243 CAAG-TGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGA 1246185 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || || | ||||||||| | | ||| || ||||| || || | Sbjct 1246184 GCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 1246125 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 | || |||||| | || | | |||| || |||| || || || || || || || Sbjct 1246124 TCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCG--ACCTCGAGGGTGATGGTCTT 1246067 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| ||||||||||| ||||||| |||||| Sbjct 1246066 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || | || || || | Sbjct 1246471 CAAG-TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCGGCCGTCCTCAA 1246413 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | ||||||||||| | ||| || ||||| ||||| | Sbjct 1246412 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGA 1246353 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||| ||||| | || | |||| || || ||||| || || ||||| |||| Sbjct 1246352 TCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTCTTGC 1246293 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||| | ||||| Sbjct 1246292 CGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153812373502470