Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq110 104 5e-17
>seq110
Length=1833661
Score = 104 bits (114), Expect = 5e-17
Identities = 151/210 (72%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| || ||||| ||||||||||| |||| | ||| | ||||| || |
Sbjct 1246243 CAAG-TGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTCGA 1246185
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || || || || | ||||||||| | | ||| || ||||| || || |
Sbjct 1246184 GCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTGGA 1246125
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
| || |||||| | || | | |||| || |||| || || || || || || ||
Sbjct 1246124 TCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCG--ACCTCGAGGGTGATGGTCTT 1246067
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| ||||||||||| ||||||| ||||||
Sbjct 1246066 GCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || || || ||||| || ||||||||||| || | | || | || || || |
Sbjct 1246471 CAAG-TGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCGGCCGTCCTCAA 1246413
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || ||||||||||| || | ||||||||||| | ||| || ||||| ||||| |
Sbjct 1246412 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTTGGA 1246353
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| ||||| | || | |||| || || ||||| || || ||||| ||||
Sbjct 1246352 TCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGTCTTGC 1246293
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| ||||| ||||| ||||| | |||||
Sbjct 1246292 CGGTGAGTGTCTTGACGAAAATTTGCAT 1246265
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153812373502470
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |