Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07- 28] 570 sequences; 31,958,638 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq110 161 2e-34 seq526 120 6e-22 seq221 116 8e-21 seq559 113 9e-20 seq536 105 1e-17 >seq110 Length=1833661 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | ||| || || |||||||||||||| | | Sbjct 1246491 CCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAA 1246432 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| || || || ||||| ||||| | ||| || ||||| || Sbjct 1246431 AGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGG 1246372 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||||||||||||||||| || ||| | ||||| ||||| || | ||| ||| Sbjct 1246371 ATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACT 1246312 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 1246311 TCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265 Score = 159 bits (176), Expect = 7e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| || | || |||||| |||||||||||||| | Sbjct 1246264 ACCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGA 1246205 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || ||||| |||| || || |||||| || Sbjct 1246204 CAGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGG 1246145 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||||| |||||||| | || || | ||||| ||||| | ||||| Sbjct 1246144 GATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGAC 1246085 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 1246084 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037 Score = 147 bits (162), Expect = 5e-30 Identities = 157/205 (77%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||||| || || |||||||||||||| | Sbjct 1246036 ACCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGA 1245977 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| || ||||| || ||||| || ||||| ||||| ||||| |||||| || Sbjct 1245976 CAGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGG 1245917 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||| || |||||||| |||||| ||||| || || | ||||| ||||| || | || | Sbjct 1245916 AATGCCTTCCTTGTCCTGGATC-TTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAA 1245858 Query 283051 CTTCGAGAGTGATCGTCTTACCCGT 283075 | ||||| || || ||||| || || Sbjct 1245857 CCTCGAGGGTAATGGTCTTGCCGGT 1245833 >seq526 Length=1022908 Score = 120 bits (132), Expect = 6e-22 Identities = 136/180 (76%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| | || ||||| |||||||| | || || || || |||||| Sbjct 770771 TTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGATC 770830 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATC 283030 ||||| || ||||| || || ||||||||||| |||||| ||||| || || | || Sbjct 770831 AAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATC-TTGCTCTTGACATTGTC 770889 Query 283031 GATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 ||| ||||| | ||||| ||||| ||||| ||||| || || | ||||| ||||| Sbjct 770890 GATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGAA 770949 >seq221 Length=1251372 Score = 116 bits (128), Expect = 8e-21 Identities = 111/141 (79%), Gaps = 1/141 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | ||||| || || || ||||||||||| | Sbjct 1048849 ACCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGA 1048908 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || |||||||||||||| || || || ||||| |||||||| || || ||||| || Sbjct 1048909 GAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGG 1048968 Query 282992 AATACCCTCCTTGTCT-TGGA 283011 ||| |||||||||||| |||| Sbjct 1048969 AATTCCCTCCTTGTCTGTGGA 1048989 >seq559 Length=875383 Score = 113 bits (124), Expect = 9e-20 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| ||| ||| | || ||||| |||| |||||| Sbjct 604773 AGGAGTTCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGT 604832 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 ||||| || |||||||| || ||||| | | |||| || || || |||| | | Sbjct 604833 CACAATACATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCT 604892 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| ||| |||||||||| || |||||| |||||| || || || || |||| Sbjct 604893 ACAACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACT 604952 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| |||||||| |||| || || | | | ||||| Sbjct 604953 TCTTCGAGAAGCGTGTTGGCGAATACCAGAAGGCTGGTGT 604992 >seq536 Length=99053 Score = 105 bits (116), Expect = 1e-17 Identities = 250/377 (66%), Gaps = 3/377 (1%) Strand=Plus/Minus Query 312486 CGCCCCCACTTGACACCGTTGACAATTGACTCGAAGTCATCGTTCAGGATAACGATATCG 312545 || |||||| | | | | ||||| || || |||||| |||| || | || ||| ||| Sbjct 21270 CGTCCCCACATCAAAGCCTTGACGATCGAGGCGAAGTTGTCGTCCATCAAAATGATGTCG 21211 Query 312546 GCTGCTTCCTTTGCAATGTCTGTAC---CACTCCCCATTGCACACCCGACGTCTGCTTCC 312602 | ||||||||||| | ||||||| || | ||| ||| ||||||| || || || Sbjct 21210 GAGGCTTCCTTTGCGACTTCTGTACCAGCAATATTCATGGCAAACCCGACATCAGCAGCC 21151 Query 312603 TTAAGAGCCGGGGCGTCGTTAGCACCATCGCCACTCGATGCGACGACGTGGCCAAGGGCC 312662 || || || || |||||||| | |||||| ||| | |||||| | ||| | | Sbjct 21150 TTTAGGGCAGGAGCGTCGTTGGTACCATCTCCAGTGACAGCGACGGTCTCGCCCATCTCT 21091 Query 312663 TTCATGAGCTGAACCAACTTATACTTATCCTCTGGGGATGAACGGGCAAGAACTTTCAGC 312722 |||| | ||| ||||| | | ||| || || || || || || || ||||| | ||| Sbjct 21090 TTCAGGCGCTTGACCAAGGTCTTCTTGTCGTCGGGAGAAGATCGCGCGAGAACCTGCAGT 21031 Query 312723 TTAGGTGCGATGGCAACCTGTTCATCGTTACTCATTGCCCGGAATTCCTTACCTTCAATG 312782 || || ||| || ||| ||| || ||||| ||||||||| ||||| | Sbjct 21030 TTTGGAATGATAGCCTTCTGCTCAGTCTTGCTCATCTTGCGGAATTCCGGTCCTTCGAGT 20971 Query 312783 GCGATATCCCCGTGCTTCAGCATACCGATTTCACTGGCAATGTGCTTCGCCGTCTGGATG 312842 || | | | || | | | || || || | ||||| ||| |||||| | ||| Sbjct 20970 GCAACACCACCTGGGGTGAAGATGCCACACTCGGTAGCAATAGCCTTTGCCGTCAGAATG 20911 Query 312843 TTATCACCGGTAACCAT 312859 || || || |||||||| Sbjct 20910 TTGTCTCCAGTAACCAT 20894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046731555532780