Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq526 118 8e-22
seq110 118 8e-22
seq221 89.7 4e-13
>seq526
Length=1022908
Score = 118 bits (130), Expect = 8e-22
Identities = 145/196 (74%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 44142 TGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGG 44201
||| | |||| ||||||||||| |||| ||| ||| | || |||| |||||| || |
Sbjct 770763 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 770822
Query 44202 CAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT-- 44259
| ||||||||||||||||| || | || | || ||||| ||| ||||| |||
Sbjct 770823 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 770882
Query 44260 CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGT 44319
|| ||| | ||||||||| || || ||||| | ||| || ||||| || ||||||||
Sbjct 770883 CATTGT--CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGT 770940
Query 44320 CTTCACGAAGATTTGC 44335
||| |||||| | |||
Sbjct 770941 CTTTACGAAGCTGTGC 770956
>seq110
Length=1833661
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184
|| ||||| ||| || ||| |||||| ||||||||||| || | ||| || ||||
Sbjct 1246477 CAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGTGTCCGGCCGTC 1246418
Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244
|| |||||||| ||||| ||||| | ||||||||| || | || | || ||||| ||
Sbjct 1246417 CTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTC 1246358
Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304
||||| ||| | | | || ||||||| |||||||| || | || || ||
Sbjct 1246357 TTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCACTTCGAGTGTGATAGT 1246298
Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||| || ||||| ||||| ||||| ||||||||
Sbjct 1246297 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265
Score = 111 bits (122), Expect = 1e-19
Identities = 153/212 (72%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || || || ||||||||||| |||| || || | || ||
Sbjct 1246246 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 1246187
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| || ||||| |||| |||||||| || | || | ||| ||||| |||
Sbjct 1246186 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 1246127
Query 44248 TATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305
|||||| ||| || ||| | ||||||||| ||| || ||||| | || || |||
Sbjct 1246126 GATCTTCGACTTGACATTGT--CGATGGTGTCGCTGGACTCGACCTCGAGGGTGATGGTC 1246069
Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| || ||||| ||||| |||||||| |||||
Sbjct 1246068 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037
Score = 107 bits (118), Expect = 1e-18
Identities = 136/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| || || || ||||||||||| ||||||||||| |||| || ||| |||| ||
Sbjct 1246017 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 1245958
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
||||| || || ||||| ||||| || ||||| || | || | |||||||| |||
Sbjct 1245957 AGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTGTCCTGG 1245898
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||||| | | |||||||||| || || ||||| | ||||| |||||
Sbjct 1245897 ATCTTGCTCTTCACATTGTCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 1245838
Query 44309 CCCGTGA 44315
|| ||||
Sbjct 1245837 CCGGTGA 1245831
>seq221
Length=1251372
Score = 89.7 bits (98), Expect = 4e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||||||||||| || |||||||| |||| ||| ||| | || ||
Sbjct 1048868 ACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCG 1048927
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| |||||||| |||||||| || | || | || ||||| || ||
Sbjct 1048928 AGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGAATTCCCTCCTTGTCTGT 1048986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987899191690
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |