Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236545.1_202017-07-
28] 570 sequences; 31,958,638 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq221 138 1e-27
seq110 136 4e-27
seq526 123 2e-23
>seq221
Length=1251372
Score = 138 bits (152), Expect = 1e-27
Identities = 111/134 (83%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || |||||||||||||||||||| |||||||||
Sbjct 1048850 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 1048909
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || |||||||||||||||||||| |||| |||||| ||||||| |||
Sbjct 1048910 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 1048969
Query 41756 ACGCTCTCCTTGTC 41769
| | |||||||||
Sbjct 1048970 ATTCCCTCCTTGTC 1048983
>seq110
Length=1833661
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||||| ||||| ||| ||||||||| ||||| ||||| ||
Sbjct 1246492 GCCTCCACGGAGACGCAGCACCAAGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 1246433
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| || || |||| || ||||||||||||||||| || || ||||| ||||||| ||
Sbjct 1246432 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 1246373
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||||| ||| ||| ||| ||| | | | |||||| || ||||
Sbjct 1246372 GATGCCCTCCTTGTCTTGGATCTTTGACTT-GACGTTGTCGATCGTGTCGGATGATTCCA 1246314
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
| || | || || || || || || || ||||| |||||||| |||||
Sbjct 1246313 CTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 1246265
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||||| || || || || ||||| ||||| ||||||||
Sbjct 1246263 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 1246204
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || |||||||||||||| || || ||||||||||| ||||| | ||
Sbjct 1246203 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 1246144
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| | |||||||||| ||| || ||| || | || | |||||||| ||||| |
Sbjct 1246143 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG--ATGGTGTCGCTGGACTCGA 1246086
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || || || || || || || ||||| ||||| ||||||||
Sbjct 1246085 CCTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 1246037
Score = 122 bits (134), Expect = 8e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || ||||| || |||||||||||||| ||||| ||||||||
Sbjct 1246035 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 1245976
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| |||||||| ||||| || || |||| ||| || ||||| | |||
Sbjct 1245975 AGGGTGCGACCGTCCTCGAGCTGTTTGCCTGCAAAAATCAAGCGTTGCTGGTCAGGTGGA 1245916
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||||| ||| || |||| || | | | |||||| |||||| ||
Sbjct 1245915 ATGCCTTCCTTGTCCTGGATCTTGCTCTTC-ACATTGTCGATGGTGTCGGACGACTCAAC 1245857
Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838
||| | || || || || || ||
Sbjct 1245856 CTCGAGGGTAATGGTCTTGCCGGT 1245833
>seq526
Length=1022908
Score = 123 bits (136), Expect = 2e-23
Identities = 142/189 (75%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 41667 TGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGG 41726
||| | ||||||| ||||| ||||||||||||||||| | || || | |||||| || |
Sbjct 770763 TGCACACCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAG 770822
Query 41727 CGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT-- 41784
|||| |||| ||||| ||||||| || | | |||||||||| ||| || |||
Sbjct 770823 CGAAGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGA 770882
Query 41785 CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGT 41844
|| | || | |||||||||||||| ||||| | ||| || || || || || || ||
Sbjct 770883 CATTGTCG--ATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGT 770940
Query 41845 CTTTACGAA 41853
|||||||||
Sbjct 770941 CTTTACGAA 770949
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462300706084000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |