Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 176 5e-39
>seq3470
Length=143118
Score = 176 bits (194), Expect = 5e-39
Identities = 479/724 (66%), Gaps = 16/724 (2%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| ||| || || ||||| ||||| || ||||| | || || || ||||||
Sbjct 116806 TGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCC 116865
Query 16736 ATGAAATCAAAAGGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
||||| || || || || || || || | | || | | | || ||| | | ||
Sbjct 116866 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTG--TTGCCGAGTGCCAACAGTA 116923
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
| ||| || || ||||| || ||||| |||| | | |||||| || | ||| |
Sbjct 116924 GGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-C 116982
Query 16854 GTACC-GGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATA 16912
| | |||||||| || ||||| || ||||| || || || || |||| ||
Sbjct 116983 TTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATGATG 117042
Query 16913 CTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
|| || | ||| | ||| | | || ||||| |||| || || |||||
Sbjct 117043 CTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAAG 117102
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATC 17032
|| || | ||||| || | | ||| || ||||| || ||||| | ||||| |||
Sbjct 117103 TCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATG 117162
Query 17033 TTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCG 17092
|| |||||||| | ||| || || || || || || ||||| ||||| || |||||
Sbjct 117163 AGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTCA 117222
Query 17093 ACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTC 17152
|||| ||||| ||||| | || |||| | |||| || |||| | ||||||| |
Sbjct 117223 ACGGCGGCAAATGCGATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATCCATCGC 117282
Query 17153 TGCACCCACTCGGCTTTT-TGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATA---A 17208
| |||| || || || ||| ||||| || | || ||||| || || | |
Sbjct 117283 AACGCCCAGTCAGCCTTCCTGCGG-ATGCATGGGATGTTGTCGATGGCATTGAACAGGTA 117341
Query 17209 T-TTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGG 17267
| ||| || || | | ||| | || || ||||||||||| ||| || | ||||
Sbjct 117342 TGTTCGCTGCTT----TGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 117397
Query 17268 AGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAA 17327
|||| ||||||||||| ||||| || ||||| |||||||| || |||| || || |
Sbjct 117398 AGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCA 117457
Query 17328 CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAA 17387
| || | ||| || || | || || ||||| || ||||| ||| |||||||| |
Sbjct 117458 CCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGA 117517
Query 17388 ACGC 17391
| ||
Sbjct 117518 ATGC 117521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517522718015160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |