Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_001697.1
Length=32355
Score E
Sequences producing significant alignments: (Bits) Value
seq3027 84.2 5e-12
seq2939 80.6 6e-11
>seq3027
Length=236980
Score = 84.2 bits (92), Expect = 5e-12
Identities = 71/86 (83%), Gaps = 1/86 (1%)
Strand=Plus/Plus
Query 348 AATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTG 407
||||| || |||| ||| |||||| ||||||||||||| | ||||||||||| | ||
Sbjct 236720 AATATAAT-GGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAAAAGTCAGGTG 236778
Query 408 CTCTACCGACTGAGCTAACGACCCAA 433
||||||| |||||||||| ||| |||
Sbjct 236779 CTCTACCAACTGAGCTAATGACTCAA 236804
>seq2939
Length=251760
Score = 80.6 bits (88), Expect = 6e-11
Identities = 62/74 (84%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415
||||| ||| |||||| ||||||||||||| | ||||||||||| | |||||||||
Sbjct 251685 TGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCA 251744
Query 416 ACTGAGCTAACGAC 429
|||||||||| |||
Sbjct 251745 ACTGAGCTAATGAC 251758
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 103410056401298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |