Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq3027 84.2 5e-12 seq2939 80.6 6e-11 >seq3027 Length=236980 Score = 84.2 bits (92), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 348 AATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTG 407 ||||| || |||| ||| |||||| ||||||||||||| | ||||||||||| | || Sbjct 236720 AATATAAT-GGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAAAAGTCAGGTG 236778 Query 408 CTCTACCGACTGAGCTAACGACCCAA 433 ||||||| |||||||||| ||| ||| Sbjct 236779 CTCTACCAACTGAGCTAATGACTCAA 236804 >seq2939 Length=251760 Score = 80.6 bits (88), Expect = 6e-11 Identities = 62/74 (84%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 356 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 415 ||||| ||| |||||| ||||||||||||| | ||||||||||| | ||||||||| Sbjct 251685 TGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAAAAGTCAGGTGCTCTACCA 251744 Query 416 ACTGAGCTAACGAC 429 |||||||||| ||| Sbjct 251745 ACTGAGCTAATGAC 251758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103410056401298