Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_001884.1 Length=134416 Score E Sequences producing significant alignments: (Bits) Value seq1109 116 3e-21 seq2217 100 2e-16 >seq1109 Length=1760699 Score = 116 bits (128), Expect = 3e-21 Identities = 238/345 (69%), Gaps = 13/345 (4%) Strand=Plus/Minus Query 94315 AGGATAACCGGCATCCGATCATGGATGTCTTCCATAAGCTCATTAGGCTTTGTTGTAATG 94374 || || || ||||| ||||| |||||||| ||||||| ||||| | || |||||| Sbjct 26614 AGAATGACTGGCATACGATCGTGGATGTCCGCCATAAGACGGTTAGGTTCAGTAGTAATG 26555 Query 94375 ATTGTGCAAGTGTATAAAGGATTGCCTTCTGGTGTGTTCCACTTTTCGTATAAGCCTGCA 94434 || |||||||| | | || |||||||| |||| | || |||||||| ||| Sbjct 26554 ATAGTGCAAGTTGAAACCTTTTTACCTTCTGGATCAATCCAAGTATCATATAAGCCAGCA 26495 Query 94435 AAAGCGAAGA--GATTGGACGATTTAAGTTTAATCCGCATAGGAATCTTAGTCTTTGGAT 94492 | | ||||| || | | ||| | | |||||| || || ||| | |||| Sbjct 26494 AGCGAGAAGATGGAGTCATC--TTTCATTAAAATCCGTATGGGTTGCTT----TACGGAT 26441 Query 94493 CAAGGCGTTT-CCATTCATAAAAACTGTCAGC-CGGTATGATACAACGTTTGCTTACGAG 94550 | | | ||| |||||||||||| | ||| || || |||||||| ||| || Sbjct 26440 CCATCCTTTTTCCATTCATAAAATC-CCGAGCATGGGATAATACAACGCTTGGAACTGAT 26382 Query 94551 C-GGCTTTCGAAAGCTGGGTTTCTCGGACAATGTTTCAGCACGGGCATTAATCATTTTAT 94609 | ||| || || ||| |||||||| | | |||||| |||||||| |||||||| |||| Sbjct 26381 CAGGCGTTTAAAGGCT-GGTTTCTCTGTGAGTGTTTCTGCACGGGCGTTAATCATCTTAT 26323 Query 94610 AGCCGATCTTTTCGTCTTTAGCCCATGGAGGGATAAGACCCCATC 94654 ||| || ||||| || || ||||| ||| | |||||||||| Sbjct 26322 TGCCTATTTTTTCATCCTTGGCCCAATTAGGAACTAGACCCCATC 26278 >seq2217 Length=1057156 Score = 100 bits (110), Expect = 2e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 123905 GATTGGATGAAGCTTAAAGAAGATGTAATGAAATATGGTCTTTATCATTCCTATAGACAA 123964 ||||||| |||||||| | || ||| || |||| || |||||| ||||| | Sbjct 518712 GATTGGAAACAGCTTAAATTTAAAGTGATGGAAAATGGCCTCTATCATGCCTATCGCATG 518771 Query 123965 GCTATTGCGCCTACGGGAAGCATCTCATATGTTCAATCATCTACAGCAGGTGTAATGCCA 124024 |||||||| || || | ||||||||| ||| | ||| | ||| | |||||||||| Sbjct 518772 GCTATTGCTCCAACAGCAAGCATCTCTTATATCCAAAATGCAACATCCAGTGTAATGCCC 518831 Query 124025 ATTATGGAGAGAATTGAGGAACGTACATACGGAAACAGTAAGACATATTATCCGATGCCA 124084 ||| | || ||||||| ||| || || | || | || |||||||||||||| Sbjct 518832 ATTGTAGAACAAATTGAGACACGAACCTATGCCAATTCAACCACGTATTATCCGATGCCC 518891 Query 124085 GGTTTATCGGCTCAGAATTGGTTCTTCTATAAGGAAGCATACGACATGGATATGTTTAAG 124144 |||| | ||| |||| || || ||| || | |||||| || ||| Sbjct 518892 TATTTACAAAAGGATAATGTCTTCTATTACAAATCAGCGTATCAGATGGATCAATTCAAG 518951 Query 124145 GTAGTTGATCTTATTGCAACAATTCAGCAGCACGTCGACCAAGGGATTTC 124194 ||| ||||| | ||||| ||||||| ||| || |||||||| || || Sbjct 518952 GTAATTGATTTGATTGCGGAGATTCAGCCGCATGTGGACCAAGGAATCTC 519001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429987863633489