Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_003157.5
Length=43106
Score E
Sequences producing significant alignments: (Bits) Value
seq2217 116 1e-21
>seq2217
Length=1057156
Score = 116 bits (128), Expect = 1e-21
Identities = 214/314 (68%), Gaps = 0/314 (0%)
Strand=Plus/Minus
Query 917 TACTGGGATTCTTTTGATGCAGGAATTTACGTAGACGTTGTGACAGGAGAACCACTTTTC 976
||||||||| | | |||| | ||||| || || || || || ||||| || |||||
Sbjct 330692 TACTGGGATACGTATGATCCGGGAATCTATGTGGATGTGAGCACCGGAGAGCCTCTTTTT 330633
Query 977 TCTTCAAAAGACAAATTTGAATCAGGTTGTGGTTGGCCAAGCTTTAGCCGCCCCATCAGC 1036
| | || |||| ||| || |||||||| ||||||||||||| ||| || |||
Sbjct 330632 GCCAGTGAGGATAAATATGATTCCGGTTGTGGCTGGCCAAGCTTTACCCGTCCAATCTTA 330573
Query 1037 CCAGACGTTGTCCGCTACAAGGAAGATAAGAGTTTCAATATGACGAGAACAGAAGTGCGC 1096
|||| ||||| ||| ||||||| | |||||| | |||||||| ||
Sbjct 330572 GCAGATGTTGTGACCTATCGAGAAGATACTTCCTATCATATGATCCGGACAGAAGTCCGG 330513
Query 1097 AGCCGTTCAGGGAATTCTCATCTGGGGCATGTCTTTACTGACGGACCTAAAGACCAAGGC 1156
|| || |||||| || ||| || || ||||| ||| || || || ||| || ||
Sbjct 330512 AGTCGCTCAGGGGATATTCACCTTGGTCATGTTTTTGACGATGGGCCCGCAGATCACGGA 330453
Query 1157 GGCCTTCGTTACTGCATCAATAGCTTGTCTATTACCTTTATTCCAAAAGCTGATATGGAA 1216
||| ||||||||||| || ||| || ||| ||| ||||| || || ||| ||
Sbjct 330452 GGCAAGCGTTACTGCATTAACAGCGCTTCGATTCACTTCATTCCTTTGGCGGAGATGCAA 330393
Query 1217 GCTAAGGGCTATGG 1230
|| || ||||| ||
Sbjct 330392 GCAAAAGGCTACGG 330379
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 137811811402392
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |