Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq564 116 7e-21
>seq564
Length=57547
Score = 116 bits (128), Expect = 7e-21
Identities = 541/844 (64%), Gaps = 16/844 (2%)
Strand=Plus/Minus
Query 94189 GAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCACTGTACTGGACAATTTCAGTGCAC 94248
||||||| |||||| || || || |||| | || ||||| | || |||||||||
Sbjct 7008 GAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCAC 6949
Query 94249 AAATTTGAAGACTTGATGATGCCGACATTTTCTTGGTTAGACTTTCTATTGATGGTATCC 94308
||||| || ||||||| |||| | ||| | ||||| ||| | ||| || |||
Sbjct 6948 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 6889
Query 94309 TTAAAGCACACAT--AAGGTGTTCCAGTTTCGATACGTGCAGAATTAATTTGGTCGAATA 94366
|| | || | || ||||||| || || ||| | | || ||| | |||
Sbjct 6888 TTGTA-CAGA-ATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATA 6831
Query 94367 ATGCACGTGCCTTCACCACCTCTTTACCTTTGCCTTCAGCCTCATATTTCTCGTACAACG 94426
| | || ||| ||| || |||||||| |||||| |||||||| |
Sbjct 6830 TTTTCTGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCT 6771
Query 94427 CCTTAAACTCTTCGCCATGGACGTCGGAAAGGCCAGGGCACTCGTGGGGGCACATCAGGG 94486
|||| ||||| || || | ||| || || || |||||||| |||| ||||||||| || |
Sbjct 6770 CCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAG 6711
Query 94487 ACCAATTCTTCCCAGCC-TTC-ACTCTCTCCATGAAGAGATCAGATACCCAGATAGCTGG 94544
|||| | || | ||| || | || ||| |||||||| | | ||||| |||
Sbjct 6710 TCCAAGTG--CCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTA 6653
Query 94545 GAAAAGATCCCTCGTCCTCAAATCTTCATTACCGGCATTCTTTCTGCAGTCAATAAAGTC 94604
||| | ||| | || | | ||||| || || ||||| | ||| || || |
Sbjct 6652 GAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTG 6593
Query 94605 CTTCACGTCCAGATGCCAATCAGAAATATAGATGGCTGCAGCTCCTCTCCTCTTGTCTCC 94664
| | ||||| ||||| || |||||||| ||| ||| | ||||| ||
Sbjct 6592 CATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCC 6533
Query 94665 TCCCTGGCTAACCTTTTTCACAGAGACGTTAAAGATTTGGAGGAACGCCATGAGACCAGG 94724
|||||| ||| | ||| | ||| ||| | | || | | | ||||| |
Sbjct 6532 ACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACC--G 6475
Query 94725 GTGG--GTACCACTCCATGACGA-AATGGGGCTTCCTTTTGCCCTCAAATCATGAAAGTG 94781
||| || || | || || |||| ||| | ||||| | | |||| ||
Sbjct 6474 TTGGATGTGCCGTTTG-TGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATG 6416
Query 94782 GATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAAT 94841
| || | || ||||| |||||||||| || || ||| || || || || ||
Sbjct 6415 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGAT 6356
Query 94842 ACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGA 94900
||| |||||||| ||||| | | | ||| | |||||| || | || || | ||||
Sbjct 6355 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 6296
Query 94901 CTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGAT 94960
|| ||| | | || ||||| || |||||||| || || || | | ||||||| |
Sbjct 6295 G-GTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGT 6237
Query 94961 CATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAA 95020
||||| || || | | || |||||| |||||||||||||||||||||||||| |
Sbjct 6236 TGTATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGA 6177
Query 95021 TCAT 95024
||||
Sbjct 6176 TCAT 6173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989539154217835
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |