Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_003345.1
Length=77670
Score E
Sequences producing significant alignments: (Bits) Value
seq3414 82.4 4e-11
seq3027 82.4 4e-11
seq2939 82.4 4e-11
seq1140 82.4 4e-11
seq1109 82.4 4e-11
>seq3414
Length=148627
Score = 82.4 bits (90), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||
Sbjct 102 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 159
>seq3027
Length=236980
Score = 82.4 bits (90), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||
Sbjct 236795 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 236738
>seq2939
Length=251760
Score = 82.4 bits (90), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||
Sbjct 251753 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 251696
>seq1140
Length=804
Score = 82.4 bits (90), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Plus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||
Sbjct 562 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 619
>seq1109
Length=1760699
Score = 82.4 bits (90), Expect = 4e-11
Identities = 53/58 (91%), Gaps = 0/58 (0%)
Strand=Plus/Minus
Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800
|||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||
Sbjct 1207870 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 1207813
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 248408491346967
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |