Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_003345.1 Length=77670 Score E Sequences producing significant alignments: (Bits) Value seq3414 82.4 4e-11 seq3027 82.4 4e-11 seq2939 82.4 4e-11 seq1140 82.4 4e-11 seq1109 82.4 4e-11 >seq3414 Length=148627 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 102 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 159 >seq3027 Length=236980 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 236795 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 236738 >seq2939 Length=251760 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 251753 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 251696 >seq1140 Length=804 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 562 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 619 >seq1109 Length=1760699 Score = 82.4 bits (90), Expect = 4e-11 Identities = 53/58 (91%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 20743 TAGCTCAGTTGGTAGAGCGCCTGACTGTTAATCAGGTAGTCGAAGGTTCGAGTCCTTC 20800 |||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||| Sbjct 1207870 TAGCTCAGTTGGTAGAGCACCTGACTTTTAATCAGGGTGTCGAAGGTTCGAGCCCTTC 1207813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248408491346967