Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 96.9 2e-15
>seq3470
Length=143118
Score = 96.9 bits (106), Expect = 2e-15
Identities = 275/420 (65%), Gaps = 2/420 (0%)
Strand=Plus/Minus
Query 22741 CGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATA 22800
|||||| | || ||||| || ||||| ||| || | || ||||| || ||||| || ||
Sbjct 117245 CGTCTCATCGCATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATC 117186
Query 22801 TTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGC 22860
|||||||||||||||||| |||||| | ||| | | || || |||||| | || |
Sbjct 117185 TTCTGGCTGAAGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCC 117126
Query 22861 CGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAA 22920
||||| || || | ||| ||||| || || | ||||| ||| || |||||
Sbjct 117125 CGTGATGAGGGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGCATCTGAAGAACAAG 117066
Query 22921 CCGTGTCAGGACGATGCACATCAAATCATATCTGATGCCGTTGACATTGAGACGGCTTTC 22980
||| |||| | || || ||||| | || ||||| |||||| || |||
Sbjct 117065 CCGAACCAGGCCCTTGTGCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTC 117006
Query 22981 TTCCAAGAGGCAC-TAAAGACACCCCTACTTGGTATGAATAGTGACAGTATGAGACTGTA 23039
|| ||| || | | | || || || || ||||| || | ||| || ||
Sbjct 117005 TTGACAGACGCTCTTCCATGCA-AGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATA 116947
Query 23040 CATACAGTTTGTTGCAGATCGCCTGCTCGATGCCCTGGGTTATGCAAAGATGTATAACGT 23099
||| | || || || |||||||| || || || || | ||| | || ||||
Sbjct 116946 CATTGAATTCGTCGCCGATCGCCTACTGTTGGCACTCGGCAACAAGAAGTTCTACAACGC 116887
Query 23100 TGCCAATCCATTTGATTTCATGGATAACATTAGCATTGAAGGTAAAACAAACTTCTTTGA 23159
|||| || || || |||||||| |||||| | | || || || |||||||| ||
Sbjct 116886 CACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGA 116827
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356218243771411
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |