Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 235 8e-57
seq564 196 7e-45
>seq3470
Length=143118
Score = 235 bits (260), Expect = 8e-57
Identities = 579/864 (67%), Gaps = 33/864 (4%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||||||||| ||||||| || ||||| | || ||| | ||||||
Sbjct 117650 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 117591
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|| ||||| || |||| ||| | | || | | || || ||| || || ||
Sbjct 117590 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 117531
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
||| | | || ||||| |||| |||||||| || |||||||| || || || || ||
Sbjct 117530 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAG-CG 117472
Query 125198 ATTCT-CTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256
||| ||| ||| || || || |||| ||||| ||||| ||||| |||||||
Sbjct 117471 CTTCAGCTCT-GAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGA 117413
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-- 125314
| |||||| | ||||| || | || || || || || | ||||| |||| ||
Sbjct 117412 TGGAGAACATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAA 117353
Query 125315 -GCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
||| || | | || || || || || ||||||| | || | || || | ||||
Sbjct 117352 AGCAGCGAACATACCTGTTC---AATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 117296
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
|| | |||| | | || ||||| |||| | || || | | |||| | | || | |
Sbjct 117295 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATCG 117236
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
|||| |||||||| |||||||||||||| || || |||||| || ||||| ||||| |
Sbjct 117235 CATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 117176
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||| || || |||||| |||| || || | |||||| | || || || || ||||
Sbjct 117175 AGAAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGG 117116
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACTATCTGCGTCCCGAGTGCAGA 125612
|| | ||| ||||| ||| || ||||| |||| ||||| | | || ||
Sbjct 117115 GCATGCACACAGACTTCGCCTGCCTTCTGTTCTCGC----ATCTGAAGAACAA--GCCGA 117062
Query 125613 TCCAG--CGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGT 125670
|||| | || || ||||| | ||||| ||||| | ||| || || ||||
Sbjct 117061 ACCAGGCCCTTGTGCAGAGCATCA------TTACCGAGGCCGTCACGATTGAGCAGGAGT 117008
Query 125671 TTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAG-CTAATGTGCGAG 125729
| | || || | || || || | | || |||||| || | || |||| |
Sbjct 117007 TCTTGACAGACGCTCTTCCATGCAAGCTTCTGGGGATGAAC-GCTGGCCTCATGTCACAA 116949
Query 125730 TACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGA---TTTAC 125786
||||| || || || || ||||| ||||||| | | ||| ||||| | |||
Sbjct 116948 TACATTGAATTCGTCGCCGATCGCCTACTGT---TGGCACTCGGCAACAAGAAGTTCTAC 116892
Query 125787 AACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTT 125846
||||||| || ||||| || |||||| | ||| || || | || |||||||||||
Sbjct 116891 AACGCCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTC 116832
Query 125847 TTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||| || ||||||||
Sbjct 116831 TTCGAGAAGCGTGTTGGCGAGTAC 116808
>seq564
Length=57547
Score = 196 bits (216), Expect = 7e-45
Identities = 389/568 (68%), Gaps = 6/568 (1%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|||||||||| ||| || || || |||||||| || | ||||| || || ||||
Sbjct 6458 ACAAACGGCACATCCAACGGTCTTGTACCAATGCTACGAGTCTACAACAACACTG-CACG 6516
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
|||||| ||||| ||||| || || ||||| ||| | ||| ||||| | || || ||
Sbjct 6517 TTACGTTGACCAGGGTGGCAACAAGCGTCCAGGTGCTTTTGCCATCTACCTTGAGCCGTG 6576
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
|||||| ||||| | | || || || | ||||| ||| ||| ||||| | ||
Sbjct 6577 GCACGCAGACGTCATGCAGTTCATGGACCTTCGCAAGAACCATGGAAAGGAAGAAGTTCG 6636
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGA 97045
|| | || ||||| || || |||||| | || ||| | || ||| |||| ||| | |
Sbjct 6637 TGCGCGCGATTTGTTCTACGCTCTCTGGATTCCCGATCTCTTTATGCAGCGTGTCGAACA 6696
Query 97046 CGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGG 97105
||| |||| |||||||||||| || | || |||||||| ||| || ||
Sbjct 6697 GAACGGCACTTGGACTCTAATGTGCCCCAACGAATGCCCTGGTCTGTCGGATGTCTACGG 6756
Query 97106 CGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGC-CGATACGTGAGACGAG 97164
|| ||||| ||| |||| | || ||| ||| ||| | |||||||||
Sbjct 6757 TGACGAGTTCAAGGAGCTGTACGAGCGTTATGAGAGAGAAGGCAAGGGCCGTGAGACGGT 6816
Query 97165 TCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224
||| ||| | || | ||| | || || | ||| ||| ||||| || || || |
Sbjct 6817 TCG-TGCTCAGAAAATATGGTATGCTATTCTCGAGGCGCAGACCGAGACCGGCACACCTT 6875
Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCA-ACGCCACTTGGGCACCATC 97283
|||||| |||||||| ||| || ||||| |||||||| | | ||| |||||||||
Sbjct 6876 TCATTCTGTACAAGGACGCCGCCAACCGCAAGAGCAACCAGAAGAATCTT-GGCACCATC 6934
Query 97284 AAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTT 97343
||| |||| ||| ||||||| || || | |||||| | ||||||| ||| || ||
Sbjct 6935 AAGAGCTCTAATTTGTGCACTGAGATCATGGAGTACTCTGCTCCGGATGAGGTCGCTGTC 6994
Query 97344 TGCGTTCTGGCATCGGTCAATCTGCCCA 97371
||| |||||| ||| | ||||||||
Sbjct 6995 TGCAATCTGGCTTCGCTTGCTCTGCCCA 7022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741026435920120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |