Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq2873 98.7 1e-15 >seq2873 Length=797338 Score = 98.7 bits (108), Expect = 1e-15 Identities = 206/302 (68%), Gaps = 4/302 (1%) Strand=Plus/Minus Query 6901 GAAATCGTATATCTTGCCCGAAGCATTCGCTTTGTGCCCGTGAGTGAGATGGCCGCCGCA 6960 ||||| ||| | | ||| |||||||| | | || || ||||| || ||||| Sbjct 652631 GAAATTGTACAGCAAGCCGGAAGCATTAACCGGGCTACCATGTGTGAGGTGTCCGCCAT- 652573 Query 6961 GTCCAAGGA-CATAGCGAGAACCGAATCACCCGGCTTCAGGAGTGCTTGGTAAACTGCCT 7019 | ||||| ||| | || || | ||||| || |||| || | || |||||| Sbjct 652572 GCGCAAGGTTCATGCCCAGTACAGTGTCACCTGGTTTCAAAGCCGCAAGATATACTGCCA 652513 Query 7020 GGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTTGCGAAAT-TGCAACTAAACAGTTCT 7078 ||| ||||||| |||||| ||||||||||| || | | ||| | |||||||||| Sbjct 652512 TGTTCGCTTGTGCACCGGAGTGAGGTTGAACATTCACATGTTCTGCTCC-AAACAGTTCT 652454 Query 7079 TTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCGGCTTTTACGCAGCCGCCATAATAC 7138 || ||||| ||| ||| | || ||| | |||| | | | | || || || || || Sbjct 652453 TTGGCACGGTCACGTGCAATGTCCTCAACGATATCGACATGTTCACAACCACCGTAGTAA 652394 Query 7139 CGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTAAAAATAGAACCCTGTGCTTTCATA 7198 |||||||| ||||| || ||||| || ||||| |||| | ||| || | |||| ||| Sbjct 652393 CGTTTGCCTGGATAGCCTTCAGCGTATTTGTTTGTAAGTACAGATCCAAGAGCTTCGATA 652334 Query 7199 AC 7200 || Sbjct 652333 AC 652332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555338646004520