Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq2971 87.8 2e-12
>seq2971
Length=246349
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/213 (70%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48517 CACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCT 48575
||| || || || ||| |||||| || ||||||||||| | || ||| || ||||||
Sbjct 200353 CACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCG-AAAGTGTCCGGCCGTCCT 200295
Query 48576 CCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCA 48635
| |||||||| ||| || | || | ||||||||| ||| || | | ||||||||
Sbjct 200294 CAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGGGATGCCCTCCTTGTCTT 200235
Query 48636 TAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGT 48693
|| || ||||| | | || || || |||| || ||| |||| ||| || ||
Sbjct 200234 GGATCTTTGACTTGACGTTGTCG--ATCGTGTCGGATGATTCCACTTCGAGTGTGATAGT 200177
Query 48694 TTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| |||||||| || || || ||||| |||||
Sbjct 200176 CTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421233041045537
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |