Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2971 93.3 4e-14 >seq2971 Length=246349 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | ||| ||||| || || | ||| || ||| || ||| |||||| Sbjct 200125 CACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGACAGAGTACGACCATCCTC 200066 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || |||| || | | ||||| || || || ||||| || ||||| | Sbjct 200065 GAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGGATACCCTCCTTGTCCTG 200006 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTT 94975 || || | |||||| | ||| ||||| || ||| ||||| || | |||||||| Sbjct 200005 GATCTTCGACTTGACATTGTCGATGGTGTC-GC-TGGACTCGACCTCGAGGGTGATGGTC 199948 Query 94976 TTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || || ||||| || || ||||||||||| Sbjct 199947 TTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 199916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448271379925320