Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq597 113 7e-21
>seq597
Length=54424
Score = 113 bits (124), Expect = 7e-21
Identities = 87/101 (86%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||||| | || || |||||||| || |||||||||||||||||
Sbjct 17694 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 17636
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 17635 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 17595
Score = 89.7 bits (98), Expect = 8e-14
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| ||||| ||| | |||| ||||||| || || |||| ||||
Sbjct 17529 TGATCTACGAAGAGACTCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGCGATG 17470
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || || ||||||||||| || || |||||||| |||||| | || | ||||| |
Sbjct 17469 CCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTTACCTCCCTCGACGTTGTCTACG 17410
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
| | || || |||||||| | | || ||||| ||
Sbjct 17409 CCCTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGG 17373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071966096141
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |