Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq597 113 7e-21 >seq597 Length=54424 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||||| | || || |||||||| || ||||||||||||||||| Sbjct 17694 GCCAAGCGTCACCGCAAGATCT-TGCGCGACAACATCCAGGGTATCACCAAGCCAGCTAT 17636 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 17635 CCGACGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTCTG 17595 Score = 89.7 bits (98), Expect = 8e-14 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595 || |||| ||||||| ||||| ||| | |||| ||||||| || || |||| |||| Sbjct 17529 TGATCTACGAAGAGACTCGTGGTGTCCTCAAGACCTTCCTCGAGGGTGTCATCCGCGATG 17470 Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655 | || || ||||||||||| || || |||||||| |||||| | || | ||||| | Sbjct 17469 CCGTCACATACACCGAGCACGCCAAGCGCAAGACTGTTACCTCCCTCGACGTTGTCTACG 17410 Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | | || || |||||||| | | || ||||| || Sbjct 17409 CCCTCAAGCGACAAGGCCGCACCCTCTACGGTTTCGG 17373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79071966096141