Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_006820.1
Length=196280
Score E
Sequences producing significant alignments: (Bits) Value
seq1120 87.8 2e-12
seq3027 84.2 3e-11
seq2939 84.2 3e-11
>seq1120
Length=31007
Score = 87.8 bits (96), Expect = 2e-12
Identities = 67/78 (86%), Gaps = 1/78 (1%)
Strand=Plus/Plus
Query 122995 TACATGCGGGTGTAGTTCAGTGGTAGAACGCTATCCTTCCAAGTTAGATGTCGTCGGTTC 123054
||||||||||||||||||| ||||||||| || ||||||||| || || ||| |||||
Sbjct 252 TACATGCGGGTGTAGTTCAATGGTAGAACTTTAGCCTTCCAAGCTA-ATAGCGTGGGTTC 310
Query 123055 GAGTCCGATCACCCGCTT 123072
|| ||| |||||||||||
Sbjct 311 GATTCCCATCACCCGCTT 328
>seq3027
Length=236980
Score = 84.2 bits (92), Expect = 3e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 122995 TACATGCGGGTGTAGTTCAGTGGTAGAACGCTATCCTTCCAAGTTAGATGTCGTCGGTTC 123054
|| |||||||||||||||| ||||||||| || ||||||||| || || ||| |||||
Sbjct 236370 TATATGCGGGTGTAGTTCAATGGTAGAACTTTAGCCTTCCAAGCTA-ATAGCGTGGGTTC 236312
Query 123055 GAGTCCGATCACCCGCTT 123072
|| ||| |||||||||||
Sbjct 236311 GATTCCCATCACCCGCTT 236294
>seq2939
Length=251760
Score = 84.2 bits (92), Expect = 3e-11
Identities = 66/78 (85%), Gaps = 1/78 (1%)
Strand=Plus/Minus
Query 122995 TACATGCGGGTGTAGTTCAGTGGTAGAACGCTATCCTTCCAAGTTAGATGTCGTCGGTTC 123054
|| |||||||||||||||| ||||||||| || ||||||||| || || ||| |||||
Sbjct 251335 TATATGCGGGTGTAGTTCAATGGTAGAACTTTAGCCTTCCAAGCTA-ATAGCGTGGGTTC 251277
Query 123055 GAGTCCGATCACCCGCTT 123072
|| ||| |||||||||||
Sbjct 251276 GATTCCCATCACCCGCTT 251259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627940235964800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |