Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq564 170 2e-37 seq2971 134 1e-26 seq3038 105 6e-18 seq3060 102 8e-17 >seq564 Length=57547 Score = 170 bits (188), Expect = 2e-37 Identities = 918/1445 (64%), Gaps = 33/1445 (2%) Strand=Plus/Minus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| |||||||||||||| | || | ||| ||| | || Sbjct 7581 TTGACGACCTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGC 7522 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||||||| ||||| ||| || | ||||| || || ||||| ||| || Sbjct 7521 TCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACG 7462 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||||| ||||||| ||| | |||| || | |||| ||||| Sbjct 7461 AGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAG 7402 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCT-CGCTGGCGGGGCT 145296 || || || || | |||||||||||||||| | ||||| || | | || Sbjct 7401 AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGAT-ACTGGAGA 7343 Query 145297 GCCTTGAAAGGAACTGTAACTGCCCCAAGTT-TTGGCGAGCTCGCAACTCGCCTCCAGAG 145355 |||| | | | |||| | || | || | || |||||||| ||||| |||| Sbjct 7342 GCCTGGGTATGTCTCGTAA-GGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAG 7284 Query 145356 CGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGT 145415 | | ||| || ||||| ||| || |||||||| | | || ||| ||| Sbjct 7283 CAGCATGATAGATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGA 7224 Query 145416 ACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCC 145475 | |||||||| || | || ||||| || || || | | || | || ||||| | Sbjct 7223 ATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTC 7164 Query 145476 GATGTTTCATGTTGCTCATCCTCGCCGACTCG-ATAGGATATCGATTACGGTCGATAATT 145534 | || | ||||||| | | ||| || | | || || || ||||| | Sbjct 7163 GGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACCGGGTAGTAGTTGATCTCGATGGTC 7105 Query 145535 TTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGA 145594 || |||| ||| || || || || || | | | | || | |||||||| | Sbjct 7104 TTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAA---A 7048 Query 145595 GCCTCG---TCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCC 145651 ||||| || | | | || || | | || | ||| |||| ||| || || || Sbjct 7047 ACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCG 6988 Query 145652 GTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTT 145711 ||| || | | ||| | | |||||| | ||||||||| | |||||||| Sbjct 6987 ACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTG 6928 Query 145712 CCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCG 145771 || ||||| | ||| || || || | |||| ||||||||||| || ||| | ||| | Sbjct 6927 CCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTG 6868 Query 145772 CCAGTCTCCACCTGCGTCTCCACGATA--AAACGGTGCAAGTCCTGCGCACGCACCTGCT 145829 || ||||| ||||| ||| | ||| | || | | | ||| ||||| ||| || Sbjct 6867 CCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCAT--ATTTTCTGAGCACGAACCGTCT 6810 Query 145830 GCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGC 145889 || ||| ||| || || | ||| ||||||| ||| || ||||||| Sbjct 6809 CACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGA 6750 Query 145890 AATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGA 145949 ||| ||||| || || || | |||||| ||||| || | ||| |||||| | || Sbjct 6749 CATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGA 6690 Query 145950 CGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAAT 146009 | |||| |||||| | ||| || | ||| || ||||| | ||| |||||||| | | | Sbjct 6689 CACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGC-ACGAACT 6631 Query 146010 CCTCAGCACCCATGTTTCGCTTCAAATT--AAGCACACTATAGATGTCCGCGTGCCACGG 146067 || ||||| ||| || | | | || || || ||| ||||||||||| Sbjct 6630 TCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCAT-GACGTCTGCGTGCCACGG 6572 Query 146068 TTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGTGACGTAC 146124 |||| |||| ||| | || ||| || |||||||||||||| |||| |||| | Sbjct 6571 CTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC 6512 Query 146125 CATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCGTAGAGTT 146184 ||||||| |||| || | ||| || | | ||| ||| | |||||| || | Sbjct 6511 AGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCC 6452 Query 146185 TATTCTGGTGCCGCGGGAGCGC--ACGCAATGAACATTCACGCCGAGACCGCCGCCGTAC 146242 || | || | | ||| | | | ||||||| | || | |||||| ||| | Sbjct 6451 AATGTATGAGC--CTGTAGCCCTGATGTTGTGAACATGAAGACCAATACCGCCAGCGTTC 6394 Query 146243 TTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC--GCTTC 146300 ||||| || ||| || ||| || |||||||| || |||||||| || |||| Sbjct 6393 TTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCATCCTTC 6334 Query 146301 GAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAGAACAACG 146360 ||| | | || ||||| || | ||||||| || || || || ||| | | Sbjct 6333 --ATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCACTGAAAAGTG 6276 Query 146361 TCGGGCTCGCGTGCGTAAACATTTTTCGGC-TCATCATCCGATACGTTTCGATAGCGTCT 146419 | || || || || || | ||| | ||| || || ||||| || || Sbjct 6275 TTGGCGAAGCATGTGTGAA-GTACTTCAACGACATGTAGTTGTATGTCTCGATCGCTGCT 6217 Query 146420 TGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGCCGCTCC 146479 | |||||| || || |||||||| | ||| || ||||||| ||| ||||| || | ||| Sbjct 6216 TCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGATCATCTGTTGCGGTCTCTCG 6157 Query 146480 GCCAC 146484 || || Sbjct 6156 GCAAC 6152 >seq2971 Length=246349 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| || || | ||||| || || || |||||||| ||| | Sbjct 200142 CCACCACGGAGACGAAGCACCAAGTGGAGAGTCGATTCTTTCTGGATGTTGTAGTCGGAC 200083 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || ||||| |||||||||||||| | || | ||||||||||| || ||| Sbjct 200082 AGAGTACGACCATCCTCGAGCTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCAGGTGGG 200023 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || ||| ||||||||| Sbjct 200022 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTGTCGCTGGACTCGACC 199963 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| ||||| || ||||| |||||||| Sbjct 199962 TCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 199916 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||||||||| || || | || |||||||| || ||||||||||| Sbjct 200371 GCCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 200312 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || || |||||| ||||||||||| ||| |||| | ||||||||||||||| || Sbjct 200311 AAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTGG 200252 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| || ||||| | || | || |||| || || | Sbjct 200251 GATGCCCTCCTTGTCTTGGATCTTTGACTTGACGTTGTCGATCGTGTCGGATGATTCCAC 200192 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| || || || |||||||| ||||| Sbjct 200191 TTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144 Score = 100 bits (110), Expect = 3e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | || |||||| || |||||||| ||| | Sbjct 199914 CCACCACGAAGACGGAGGACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAC 199855 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||||||| | || || || |||||||| || || Sbjct 199854 AGGGTGCGACCGTCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGA 199795 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||| | | || | || |||| ||||| | Sbjct 199794 ATGCCTTCCTTATCCTGGATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACC 199735 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||||| ||| || ||||| Sbjct 199734 TCGAGGGTAATGGTCTTGCCGGT 199712 >seq3038 Length=227906 Score = 105 bits (116), Expect = 6e-18 Identities = 106/138 (77%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| || || | || | ||| |||||| ||||||||||| ||| Sbjct 26298 CCACCACGCAGACGGAGGACGAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGAG 26357 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| || |||||||||||||| || Sbjct 26358 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGTGGA 26417 Query 131128 ATTCCTTCTTTGTCGGTG 131145 ||||| || ||||| ||| Sbjct 26418 ATTCCCTCCTTGTCTGTG 26435 >seq3060 Length=213164 Score = 102 bits (112), Expect = 8e-17 Identities = 133/184 (72%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 131042 ACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGT 131101 || |||| || ||||| || ||| | |||||| ||||| | |||||| || ||| Sbjct 59195 ACACCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGA 59254 Query 131102 AGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCT 131161 |||| ||||||||||||||||| |||||||| || ||||| ||| || ||||| | Sbjct 59255 AGATCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACAT 59314 Query 131162 GCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTA 131221 || | || ||| | ||||||| |||| || | ||| || || || || || |||| Sbjct 59315 TGTCGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTA 59374 Query 131222 CGAA 131225 |||| Sbjct 59375 CGAA 59378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471991931134080