Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq2971 120 3e-22
>seq2971
Length=246349
Score = 120 bits (132), Expect = 3e-22
Identities = 156/214 (73%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || |||||| | ||||| || ||||||| |||| || |||||
Sbjct 199916 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCCAGC 199975
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||||| ||||| || || ||| || ||| ||||| || || || ||||||||||
Sbjct 199976 GACACCATCGA--CAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATCCCACCTGACC 200033
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| ||||| | |||||||| ||||| || | || |||| ||| ||| || ||| ||||
Sbjct 200034 AGCAGCGCCTGATTTTTGCAGGCAAGCAGCTCGAGGATGGTCGTACTCTGTCCGACTACA 200093
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
| || || |||||||| || || || || |||||
Sbjct 200094 ACATCCAGAAAGAATCGACTCTCCACTTGGTGCT 200127
Score = 87.8 bits (96), Expect = 2e-12
Identities = 132/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082
||||| || |||| || |||| || |||||||| ||||| ||||| |||||
Sbjct 199712 ACCGGCAAGACCATTACCCTCGAGGTTGAGTCGTCCGACACCATCGATAATGTGAAGAGC 199771
Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142
|| ||| || || ||||| |||||||||||||| || || | ||||| || |||||
Sbjct 199772 AAGATCCAGGATAAGGAAGGCATTCCACCTGACCAGCAACGCTTGATTTTCGCAGGCAAG 199831
Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202
|| | || || | |||||| || ||| ||||| || || || || ||| || |||
Sbjct 199832 CAGCTCGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGCACTCTCCAT 199891
Query 25203 TTAGTGCT 25210
| || ||
Sbjct 199892 CTCGTCCT 199899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433309320448655
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |