Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq3470 163 3e-35 >seq3470 Length=143118 Score = 163 bits (180), Expect = 3e-35 Identities = 485/732 (66%), Gaps = 21/732 (3%) Strand=Plus/Plus Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985 ||| || || ||||| ||||| || ||||| | || ||||| || ||||| | | | Sbjct 116928 ATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG-CTTGC 116986 Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044 | || |||||||| |||||||| || | ||| || ||||| || | | ||| || Sbjct 116987 ATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATGATG-CTC 117045 Query 93045 TTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGT 93101 | | | | |||| | || || | | | || | ||| | ||| || |||| Sbjct 117046 TG-CACAAGGGCCTGGTTCGGCTTGTTCTTC-AGATGCGAGAACAGAAGGCAGGCGAAGT 117103 Query 93102 CGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACA 93161 | || || | || || || || || || | ||| || |||||| | || | | | Sbjct 117104 CTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGA 117163 Query 93162 GTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCA 93221 | || |||||||| ||||| || || | ||||||| ||||| || || || || || | Sbjct 117164 GACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTCAA 117223 Query 93222 CGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-CTGA--TCCATT 93278 |||| |||||||| | | ||| ||| || || || || || | || ||||| Sbjct 117224 CGGCGGCAAATGCGATGAGACGGAGGGCGAA---TGTCGAGTTCTTGTCAGAAATCCATC 117280 Query 93279 TTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGCGTTAAATAGG 93337 || ||||| || || || | || || || | |||| ||||| || || || ||| Sbjct 117281 GCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGA-TGTTGTCGATGGCATTGAACAGG 117339 Query 93338 TAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAA 93397 || ||||| | | || | |||||||||||||| | || ||||| | || || Sbjct 117340 TATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAG 117399 Query 93398 TGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACT 93457 |||| |||||||| || ||||| |||||||| |||| || |||| ||||||||| Sbjct 117400 TGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACC 117459 Query 93458 TCTTGAG-AAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516 || ||| || | ||| ||||| || || ||||| || ||||||||||| || || || Sbjct 117460 TC-AGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAA 117518 Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCCCAATCGGA 93573 || | | || || || | || || || || | |||| | ||| ||| Sbjct 117519 TGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTG 117578 Query 93574 TAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTA 93633 ||||| || || ||||| | || || | ||||| || || || || || |||||||| Sbjct 117579 GAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTA 117638 Query 93634 CATATCCCATAT 93645 ||| | |||||| Sbjct 117639 CATTTGCCATAT 117650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556836179791880