Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3470 286 7e-72 seq564 201 2e-46 seq365 87.8 3e-12 >seq3470 Length=143118 Score = 286 bits (316), Expect = 7e-72 Identities = 582/854 (68%), Gaps = 34/854 (4%) Strand=Plus/Minus Query 42309 ATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTGGCCAAGGA- 42367 |||||||| ||||| || ||| |||||| || ||||||||||| ||| | ||||| Sbjct 117641 ATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTGTCGAAGGAT 117582 Query 42368 ---CACGGCCGGCT---GGGAGTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAAAACAT 42421 |||| | || | || ||| | | |||||| || ||| || | || | Sbjct 117581 CTCCACGACTGGAACAAGCGACTCAACGACGACGAACGA----TTCTTCATCTCACACGT 117526 Query 42422 ACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481 || || ||||||||||| || || ||||| ||||| |||||||| | | | |||| Sbjct 117525 CCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGCTTCAG 117466 Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 ||||||||| | ||||| || |||||||||||||||||||| || ||||| Sbjct 117465 CTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATGGAGAA 117406 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 | | ||||| ||| || || || || | || |||||| || || |||| Sbjct 117405 CATCCACTCCGAGACATATTCCCTTCTCATCGATACATACATCAGCGAGCCAAAGCAGCG 117346 Query 42602 TAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGC 42661 | |||||||| ||||| || | || || |||||| | |||||| |||||||| Sbjct 117345 AACATACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGGCTGACTGGGC 117286 Query 42662 GCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCG 42720 | | ||||| | | || | | || |||| | | || | || ||| ||| Sbjct 117285 GTTGCGATGGATTTCT-GACAAGAACTCGACATTCGCCCTCCGTCTCATCGCATTTGCCG 117227 Query 42721 CCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA-G 42779 |||| ||||||||||||||||| || | || || | ||||||||||| ||| | | Sbjct 117226 CCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGAAGAAACGTG 117167 Query 42780 GTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCAT 42839 || || ||| |||| ||||| ||||||||||| |||||| | | || ||||| |||| Sbjct 117166 GTCTC-ATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAGGGCATGCAC 117108 Query 42840 AGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAGCGG 42899 | ||||| |||||||| ||||||||| || || | | ||||||| ||| | Sbjct 117107 ACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAACCAGGCCCTT 117051 Query 42900 GTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTG 42959 || | | |||||| || |||||||| ||| ||| |||||||| | || || |||| Sbjct 117050 GTGCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGAC--AGACGCTC 116993 Query 42960 C-CCGTGTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCG 43017 || || || | || |||||| | |||||||| | ||||| | | ||||| Sbjct 116992 TTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAATTCGTCG 116933 Query 43018 CCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TCTACAACACGCCGTGCC 43071 |||| | || |||| ||| ||| || | |||||||| | | || Sbjct 116932 CCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACAACGCCACCAACC 116879 Query 43072 CCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCG 43131 |||||||||| ||||||||||| ||| ||| |||||||||||||| ||||||||||| | Sbjct 116878 CCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGTG 116819 Query 43132 TCGCCGACTACCAG 43145 | | ||| |||||| Sbjct 116818 TTGGCGAGTACCAG 116805 >seq564 Length=57547 Score = 201 bits (222), Expect = 2e-46 Identities = 480/719 (67%), Gaps = 15/719 (2%) Strand=Plus/Minus Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 ||||| |||||||| || ||||| |||| | ||||| | ||||| ||||| | Sbjct 7005 GCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAA 6946 Query 244748 TTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTG 244807 ||| || |||||||||||| || | || || ||| |||| |||| |||||||||| Sbjct 6945 TTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTG 6886 Query 244808 TAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCC 244867 || || ||||| || ||||||||| ||| || |||| | | ||| | | | Sbjct 6885 TACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTTTC 6826 Query 244868 CTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCG 244927 ||| |||||| || ||||||| ||| ||| || || |||||| ||| | Sbjct 6825 TGAGCACGAACCGTCTCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTG 6766 Query 244928 AACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCA--CGACGCCGGGCACATGAGACTCC 244985 |||||| || |||| || || || ||||| || | |||||||| ||| ||| Sbjct 6765 AACTCGTCACCGTAGACATCCGACAGACCAGGGCATTCGTTG--GGGCACATTAGAGTCC 6708 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 | |||| | | ||| | |||||| ||||| ||||| |||||||| || | ||| | Sbjct 6707 AAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACA 6648 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 || | | | || ||| ||| |||||| | || |||| || | | || Sbjct 6647 AATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGA 6588 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 |||| ||||||| ||||| | ||||| || | || || || ||||||||||| |||| Sbjct 6587 CGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCT 6528 Query 245166 GGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAG 245224 |||| || | | | | | |||| ||| || || | || || | ||||| || Sbjct 6527 GGTCAACGTAACGTGCAGTG-TTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGAT 6469 Query 245225 TGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACATG--- 245281 |||||| ||||| ||||| | ||| | |||||| |||| || ||||| Sbjct 6468 GTGCCGTTTGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTG----TGAACATGAAG 6413 Query 245282 -CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCC 245340 || | ||||| |||| ||||||||| | ||| || |||||| |||||| || || Sbjct 6412 ACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACC 6353 Query 245341 CTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCT-TGGGG 245398 || |||||||| ||||||| | || |||||||| | ||||| | || ||||| Sbjct 6352 ATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGG 6294 >seq365 Length=79719 Score = 87.8 bits (96), Expect = 3e-12 Identities = 100/131 (76%), Gaps = 4/131 (3%) Strand=Plus/Plus Query 242937 GAGCTGATGAGGTTCCCGGACAGGACCACTCCGATCGGACAGATGATCAACTCGTACCTG 242996 |||| ||||| |||||||||||||| || ||||||||||||||||||| || || Sbjct 14722 GAGCATATGAGATTCCCGGACAGGACGACAGTGATCGGACAGATGATCAACAGCTATCT- 14780 Query 242997 CTCAACAAG-AGCG-ATCTGGACGATCACGTCGTACACCTCCTGTTCTCGGCCAACCGAT 243054 ||| || | || | | || ||||||| | |||| || || |||||||| || |||| Sbjct 14781 -CCAAGGAGCATCGCAACAAGAAGATCACGCCATACATCTGCTTTTCTCGGCGAATCGAT 14839 Query 243055 GGGAAGCCGCC 243065 ||||||| ||| Sbjct 14840 GGGAAGCTGCC 14850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944297448403120