Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3470 136 5e-27 >seq3470 Length=143118 Score = 136 bits (150), Expect = 5e-27 Identities = 526/818 (64%), Gaps = 25/818 (3%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || ||||| ||||||||||||||||| ||||| ||| ||| || |||||||| Sbjct 116808 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCAT 116867 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871 || || || ||||| | | ||| | | |||||| | | | | | || Sbjct 116868 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT----- 116922 Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931 || ||||| | |||| | |||||||| | ||||| ||| |||||| || | || Sbjct 116923 -AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG 116981 Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991 || ||||| || ||||| | |||| ||| |||||| ||||| || | ||| Sbjct 116982 CTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATGAT 117041 Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051 | || | | || || | || || | | ||| || ||| || Sbjct 117042 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 117101 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 ||| ||| | ||||| |||||||||||||| || |||||||| || || | ||| Sbjct 117102 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 117161 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 |||||| || ||||||| |||||| || ||| ||| || || ||||||||||| ||||| Sbjct 117162 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTC 117221 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCA 126228 || || || || | |||||| || || | ||| || |||| || ||| Sbjct 117222 AACGGCGGCAAATGCGATGAGACGGAGGGCGAATG---TCGAGTTCTTGTCAGAAATCCA 117278 Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 126287 || |||||| | ||||| | ||| || |||| | | | ||| || || || Sbjct 117279 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 117338 Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 126347 || ||| | || ||| || ||||||| |||| ||||| |||||||| ||| Sbjct 117339 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 117397 Query 126348 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 126406 ||||| | | ||| || | ||| | ||||||| | || || || ||||| Sbjct 117398 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 117456 Query 126407 ACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 126466 |||||| | || | || ||||| ||||| |||||||| | || || Sbjct 117457 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 117516 Query 126467 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 126523 || || |||| | ||||| |||| | ||||| | | | ||||||||| Sbjct 117517 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 117576 Query 126524 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | ||||||||||| ||||| | |||||| || ||||| Sbjct 117577 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 117614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597327189503960