Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 136 5e-27
>seq3470
Length=143118
Score = 136 bits (150), Expect = 5e-27
Identities = 526/818 (64%), Gaps = 25/818 (3%)
Strand=Plus/Plus
Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817
||| || ||||| ||||||||||||||||| ||||| ||| ||| || ||||||||
Sbjct 116808 GTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTCCAT 116867
Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA-----TTGTTGGC-ACCCCAATCTGTTTGAG 125871
|| || || ||||| | | ||| | | |||||| | | | | | ||
Sbjct 116868 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTTGCCGAGTGCCAACAGT----- 116922
Query 125872 GAGACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAG 125931
|| ||||| | |||| | |||||||| | ||||| ||| |||||| || | ||
Sbjct 116923 -AGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGAAG 116981
Query 125932 GTTACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGAT 125991
|| ||||| || ||||| | |||| ||| |||||| ||||| || | |||
Sbjct 116982 CTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATGAT 117041
Query 125992 GGCGTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAA 126051
| || | | || || | || || | | ||| || ||| ||
Sbjct 117042 GCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGAACAGAAGGCAGGCGAA 117101
Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111
||| ||| | ||||| |||||||||||||| || |||||||| || || | |||
Sbjct 117102 GTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCAT 117161
Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171
|||||| || ||||||| |||||| || ||| ||| || || ||||||||||| |||||
Sbjct 117162 GAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTC 117221
Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCA 126228
|| || || || | |||||| || || | ||| || |||| || |||
Sbjct 117222 AACGGCGGCAAATGCGATGAGACGGAGGGCGAATG---TCGAGTTCTTGTCAGAAATCCA 117278
Query 126229 CTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCAAAGA 126287
|| |||||| | ||||| | ||| || |||| | | | ||| || || ||
Sbjct 117279 TCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAG 117338
Query 126288 GTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGC 126347
|| ||| | || ||| || ||||||| |||| ||||| |||||||| |||
Sbjct 117339 GTATGTTCGCTGCT-TTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGG 117397
Query 126348 CGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGT 126406
||||| | | ||| || | ||| | ||||||| | || || || |||||
Sbjct 117398 AGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 117456
Query 126407 ACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAA 126466
|||||| | || | || ||||| ||||| |||||||| | || ||
Sbjct 117457 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 117516
Query 126467 AACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCG 126523
|| || |||| | ||||| |||| | ||||| | | | |||||||||
Sbjct 117517 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 117576
Query 126524 TCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
| ||||||||||| ||||| | |||||| || |||||
Sbjct 117577 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCA 117614
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597327189503960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |