Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2971 100 3e-16 seq3060 87.8 2e-12 >seq2971 Length=246349 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 ||||| ||||| | || ||| | ||||| || || ||||| ||||| || ||||| | Sbjct 200370 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCC--G 200313 Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231 | || | | || || | || || || ||| | || | || ||||||||||| | Sbjct 200312 AAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 200253 Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290 | ||||| || || ||||| || ||| |||| || | || | |||||||| || || Sbjct 200252 GGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGATTCC 200194 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || |||||||| || || || || ||||||||||| Sbjct 200193 ACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191 || ||||| || || ||||| ||||| || || ||| | ||| | || || Sbjct 199896 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 199837 Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251 | || || |||||| | ||||| ||||||||||| || ||||||||||| ||||| || Sbjct 199836 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 199777 Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311 || || || | || | ||||||||| ||||| || ||||| |||| || ||| Sbjct 199776 ATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 199717 Query 45312 CCGGT 45316 ||||| Sbjct 199716 CCGGT 199712 >seq3060 Length=213164 Score = 87.8 bits (96), Expect = 2e-12 Identities = 128/181 (71%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||| ||||| ||||| ||| || ||| | ||| ||||| || ||||| ||| | | Sbjct 59198 CCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 59257 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270 |||| || ||||||||||| || || || || || || || || || |||| | Sbjct 59258 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 59317 Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330 | | ||||||| |||||||| ||||| || | || ||||| || || || ||||| | Sbjct 59318 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 59377 Query 45331 A 45331 | Sbjct 59378 A 59378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451983215808520