Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq2971 100 3e-16
seq3060 87.8 2e-12
>seq2971
Length=246349
Score = 100 bits (110), Expect = 3e-16
Identities = 163/230 (71%), Gaps = 6/230 (3%)
Strand=Plus/Minus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
||||| ||||| | || ||| | ||||| || || ||||| ||||| || ||||| |
Sbjct 200370 CCTCCACGGAGACGCAGCACCAAGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCC--G 200313
Query 45174 ACGGTTTTAGAA--TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCG 45231
| || | | || || | || || || ||| | || | || ||||||||||| |
Sbjct 200312 AAAGTGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCCGGTG 200253
Query 45232 GAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCG 45290
| ||||| || || ||||| || ||| |||| || | || | |||||||| || ||
Sbjct 200252 GGATGCCCTCCTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATCGTGTCGGATGATTCC 200194
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||||||| || | || |||||||| || || || || |||||||||||
Sbjct 200193 ACTTCGAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATTTGCAT 200144
Score = 86.0 bits (94), Expect = 6e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || ||||| ||||| || || ||| | ||| | || ||
Sbjct 199896 ACGAGATGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCG 199837
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| || || |||||| | ||||| ||||||||||| || ||||||||||| ||||| ||
Sbjct 199836 AGCTGCTTGCCTGCGAAAATCAAGCGTTGCTGGTCAGGTGGAATGCCTTCCTTATCCTGG 199777
Query 45252 ATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTG 45311
|| || || | || | ||||||||| ||||| || ||||| |||| || |||
Sbjct 199776 ATCTTGCTCTTCACATTATCGATGGTGTCGGACGACTCAACCTCGAGGGTAATGGTCTTG 199717
Query 45312 CCGGT 45316
|||||
Sbjct 199716 CCGGT 199712
>seq3060
Length=213164
Score = 87.8 bits (96), Expect = 2e-12
Identities = 128/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210
|||| ||||| ||||| ||| || ||| | ||| ||||| || ||||| ||| | |
Sbjct 59198 CCTTCTGGATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAACTGCTTTCCAGCGAAGA 59257
Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270
|||| || ||||||||||| || || || || || || || || || |||| |
Sbjct 59258 TCAAACGCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGGATCTTGCTCTTGACATTGT 59317
Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330
| | ||||||| |||||||| ||||| || | || ||||| || || || ||||| |
Sbjct 59318 CGATGGTGTCGCTCGACTCGACCTCGAGCGTGATGGTCTTGCCAGTGAGGGTCTTTACGA 59377
Query 45331 A 45331
|
Sbjct 59378 A 59378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451983215808520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |