Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq1140 98.7 1e-15 seq2939 95.1 2e-14 seq3027 87.8 2e-12 seq1440 84.2 3e-11 >seq1140 Length=804 Score = 98.7 bits (108), Expect = 1e-15 Identities = 118/157 (75%), Gaps = 9/157 (6%) Strand=Plus/Minus Query 31937 GGACTTGAACCTCCACGTCGCAAGGACACTGGAACCTAAACCCAGCGCGTCTACCAATTC 31996 ||||||||||| ||||||| || ||| || || ||||| | || |||||| ||||||| Sbjct 706 GGACTTGAACCCCCACGTC--AAAGACGCTAGATCCTAAGTCTAGTGCGTCTGCCAATTC 649 Query 31997 CGCCATAC-CG-----ACTGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAG 32050 ||||| || || | || || ||| | ||| |||||||| |||| ||| ||| Sbjct 648 CGCCACACGCGCATATAAAGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAA 589 Query 32051 AAGGCAGTTGCTCTATCCAGCTGAGCTATTGAGTCAT 32087 ||| ||| ||||||| ||| |||||||| ||| |||| Sbjct 588 AAGTCAGGTGCTCTA-CCAACTGAGCTAATGACTCAT 553 >seq2939 Length=251760 Score = 95.1 bits (104), Expect = 2e-14 Identities = 116/155 (75%), Gaps = 9/155 (6%) Strand=Plus/Plus Query 31937 GGACTTGAACCTCCACGTCGCAAGGACACTGGAACCTAAACCCAGCGCGTCTACCAATTC 31996 ||||||||||| ||||||| || ||| || || ||||| | || |||||| ||||||| Sbjct 251609 GGACTTGAACCCCCACGTC--AAAGACGCTAGATCCTAAGTCTAGTGCGTCTGCCAATTC 251666 Query 31997 CGCCATAC-CG-----ACTGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAG 32050 ||||| || || ||| || ||| | ||| |||||||| |||| ||| ||| Sbjct 251667 CGCCACACGCGCATATGATGGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAA 251726 Query 32051 AAGGCAGTTGCTCTATCCAGCTGAGCTATTGAGTC 32085 ||| ||| ||||||| ||| |||||||| ||| || Sbjct 251727 AAGTCAGGTGCTCTA-CCAACTGAGCTAATGACTC 251760 >seq3027 Length=236980 Score = 87.8 bits (96), Expect = 2e-12 Identities = 119/163 (73%), Gaps = 11/163 (7%) Strand=Plus/Plus Query 31934 AGAGGACTTGAACCTCCACGTCGCA-AGGACACTGGAACCTAAACCCAGCGCGTCTACCA 31992 |||||||| ||||||||||| | || ||| | |||| |||| |||||||| ||| Sbjct 236642 AGAGGACTCGAACCTCCACGGGGGTTAGCCCACACGGACCTGAACCGTGCGCGTCTGCCA 236701 Query 31993 ATTCCGCCA-TACCG--------ACTGGCGACTCAAGTAGGATTCGAACCTACGACCGAC 32043 ||||||||| |||| | ||| || ||| | ||| |||||||| |||| | Sbjct 236702 ATTCCGCCACGACCGCAAAATATAATGGTGAGTCATGAAGGGCTCGAACCTTCGACACCC 236761 Query 32044 TGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGAGTCA 32086 || ||| ||| ||| ||||||| ||| |||||||| ||| ||| Sbjct 236762 TGATTAAAAGTCAGGTGCTCTA-CCAACTGAGCTAATGACTCA 236803 >seq1440 Length=381215 Score = 84.2 bits (92), Expect = 3e-11 Identities = 57/64 (89%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGA 32082 ||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||| ||| Sbjct 321187 GGATTCGAACCCCCGACCGACGGCTTAGAAGGCCGTTGCTCTATCCTGCTGAGCTACTGA 321128 Query 32083 GTCA 32086 | || Sbjct 321127 GACA 321124 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 32023 GGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCCAGCTGAGCTATTGA 32082 ||||||||||| |||||||| ||||||||| |||||||||||||||||||||| ||| Sbjct 328789 GGATTCGAACCCCCGACCGACGCCTTAGAAGGGCGTTGCTCTATCCAGCTGAGCTACTGA 328848 Query 32083 GTCATG 32088 | |||| Sbjct 328849 GACATG 328854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622097294307280