Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq564 143 4e-29
>seq564
Length=57547
Score = 143 bits (158), Expect = 4e-29
Identities = 446/673 (66%), Gaps = 22/673 (3%)
Strand=Plus/Minus
Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942
||||| |||||| |||||||| ||| || ||| | || | || || ||||||
Sbjct 6967 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCT 6908
Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001
||||||||| || ||||||||||| ||||| || | ||| |||| |||| | ||
Sbjct 6907 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 6848
Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060
| ||||| ||| | || |||| || || |||| | | |||| |
Sbjct 6847 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 6790
Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120
|| || ||||||| || || || |||||| || ||| ||| || || |||
Sbjct 6789 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCAT 6730
Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179
| ||||| ||||| |||| ||| | | | || | || || | || |||||| || ||
Sbjct 6729 TCGTTGGGGCACATTAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 6671
Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239
| ||||| || |||| |||| ||| || || | || | | || | |||| |||||||
Sbjct 6670 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 6611
Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297
| ||||| | | ||| | ||| |||||||||||||| | | | ||| |
Sbjct 6610 GCGAAGGTCCATGAA--CTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAA 6553
Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAGTCATCGCGTTGAAAAC 205353
|| ||||| | |||||| ||||||||||| || | ||| ||| | |||| | ||
Sbjct 6552 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC-AGTGTT---GTTGTAGAC 6497
Query 205354 TCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTC 205413
||| ||||| || || |||||||||| || ||||| |||| | ||| ||||||
Sbjct 6496 TCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGT 6437
Query 205414 AGCCCTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC 205472
|||||| | |||| || | | ||||| ||||||| ||||| |||| ||| |
Sbjct 6436 AGCCCTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCAC 6378
Query 205473 A-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531
| ||||| || ||| |||||| || | ||| || ||| || | ||||| ||
Sbjct 6377 ATATCTTG-AGGGTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAG 6319
Query 205532 CACGAAGCCAGCT 205544
|| || || ||||
Sbjct 6318 CAGGATGCTAGCT 6306
Score = 89.7 bits (98), Expect = 8e-13
Identities = 437/685 (64%), Gaps = 8/685 (1%)
Strand=Plus/Minus
Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATG 203896
|| ||| || |||||||| || |||| | | | ||| | ||| ||| ||||||||||||
Sbjct 7930 CTGGTCGACAGTGAACTGGATTGGCGCTGAAG-CAG-CTTGCGTTCGGAGATAGTACATG 7873
Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956
|| ||||| || || || ||| || | ||||||| | | |||| || | |
Sbjct 7872 CCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTAATCTTGCCCATGGTT 7813
Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016
|| || |||||| ||||||| ||| |||||||| |||| | || || ||
Sbjct 7812 GGCTCCTTCATGTGGATGTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCA 7753
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076
||||| | | ||| | ||| |||||||| || |||||| | | | || |
Sbjct 7752 GCCATCTGCACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGG 7693
Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135
| | || | | | | | |||| | ||||| ||||| || || | | || |
Sbjct 7692 TCGTCTGGAATGT-TGGGGATGCGCTGAATGGAGCCATTGTCAGCGATGATGCGGTTCTT 7634
Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195
| | | ||| ||||| ||| || || ||| || || ||||||| ||
Sbjct 7633 CATGTTCTCTGACCACAGGCCACGGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGAC 7574
Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255
||| || || || | || ||| | || | | | | |||| | ||| |||| |||||
Sbjct 7573 CTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCA 7514
Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315
|||||| ||| | ||||| | ||| ||| || ||||| || || | ||| || ||
Sbjct 7513 CTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGA 7454
Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375
|||||||||||||| | || | ||| ||| || | || |||||| | | |
Sbjct 7453 GTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT 7394
Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435
|| || ||||||||||||| |||| | ||| || ||||| ||| |||
Sbjct 7393 AGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 7334
Query 204436 CGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGT 204494
||| ||||| | || | || || || |||| ||| || || | | || || |
Sbjct 7333 TGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGAT 7275
Query 204495 ACATGGTCTCAAAGATCTGAACGTT 204519
| ||||||||||| ||||| | |||
Sbjct 7274 AGATGGTCTCAAAAATCTGGATGTT 7250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795120044200720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |