Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq564 143 4e-29 >seq564 Length=57547 Score = 143 bits (158), Expect = 4e-29 Identities = 446/673 (66%), Gaps = 22/673 (3%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||||| |||||| |||||||| ||| || ||| | || | || || |||||| Sbjct 6967 CTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCT 6908 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 ||||||||| || ||||||||||| ||||| || | ||| |||| |||| | || Sbjct 6907 CTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTC 6848 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACTTGCTTCACGTACATC-CCTTGAGAC 205060 | ||||| ||| | || |||| || || |||| | | |||| | Sbjct 6847 G-AGAATAGCATACCATATTTTCTGAGCACGAACCGTCT-CACGGCCCTTGCCTTCTCTC 6790 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 || || ||||||| || || || |||||| || ||| ||| || || ||| Sbjct 6789 TCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGACCAGGGCAT 6730 Query 205121 TTTTTGGGACACATCAGAGACCACAT-CTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||||| ||||| |||| ||| | | | || | || || | || |||||| || || Sbjct 6729 TCGTTGGGGCACATTAGAGTCCAAGTGCCGTTC-TGTTCGACACGCTGCATAAAGAGATC 6671 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 | ||||| || |||| |||| ||| || || | || | | || | |||| ||||||| Sbjct 6670 GGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTT 6611 Query 205240 TTTCAAGTCCAGCCAAGCCGCA--ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATT 205297 | ||||| | | ||| | ||| |||||||||||||| | | | ||| | Sbjct 6610 GCGAAGGTCCATGAA--CTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAA 6553 Query 205298 GCGCCTGGCCTCTTGTTCCCACCCTGGTCCAC----CATGCGAGTCATCGCGTTGAAAAC 205353 || ||||| | |||||| ||||||||||| || | ||| ||| | |||| | || Sbjct 6552 GCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGC-AGTGTT---GTTGTAGAC 6497 Query 205354 TCGCAGCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTC 205413 ||| ||||| || || |||||||||| || ||||| |||| | ||| |||||| Sbjct 6496 TCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTGT 6437 Query 205414 AGCCCTCACGTTG-GAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGC 205472 |||||| | |||| || | | ||||| ||||||| ||||| |||| ||| | Sbjct 6436 AGCCCTGATGTTGTGAACATGAAG-ACCAATACCGCCAGCGTTCTTGGAGATCATGGCAC 6378 Query 205473 A-CTCTTGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAG 205531 | ||||| || ||| |||||| || | ||| || ||| || | ||||| || Sbjct 6377 ATATCTTG-AGGGTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAG 6319 Query 205532 CACGAAGCCAGCT 205544 || || || |||| Sbjct 6318 CAGGATGCTAGCT 6306 Score = 89.7 bits (98), Expect = 8e-13 Identities = 437/685 (64%), Gaps = 8/685 (1%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAAT-GGCGTTCACGGCAGGCCTGC-TTCTCAGATAGTACATG 203896 || ||| || |||||||| || |||| | | | ||| | ||| ||| |||||||||||| Sbjct 7930 CTGGTCGACAGTGAACTGGATTGGCGCTGAAG-CAG-CTTGCGTTCGGAGATAGTACATG 7873 Query 203897 CCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTG 203956 || ||||| || || || ||| || | ||||||| | | |||| || | | Sbjct 7872 CCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTAATCTTGCCCATGGTT 7813 Query 203957 GGGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCG 204016 || || |||||| ||||||| ||| |||||||| |||| | || || || Sbjct 7812 GGCTCCTTCATGTGGATGTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCA 7753 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTG 204076 ||||| | | ||| | ||| |||||||| || |||||| | | | || | Sbjct 7752 GCCATCTGCACGATGTTACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGG 7693 Query 204077 TGTTGAGGCACATCTTCCCACGTCCTGA-TCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | | || | | | | | |||| | ||||| ||||| || || | | || | Sbjct 7692 TCGTCTGGAATGT-TGGGGATGCGCTGAATGGAGCCATTGTCAGCGATGATGCGGTTCTT 7634 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 | | | ||| ||||| ||| || || ||| || || ||||||| || Sbjct 7633 CATGTTCTCTGACCACAGGCCACGGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGAC 7574 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || || || | || ||| | || | | | | |||| | ||| |||| ||||| Sbjct 7573 CTGGAACTCGCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCA 7514 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 |||||| ||| | ||||| | ||| ||| || ||||| || || | ||| || || Sbjct 7513 CTCGTTAAAGCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGA 7454 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACT 204375 |||||||||||||| | || | ||| ||| || | || |||||| | | | Sbjct 7453 GTTGCGCACACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT 7394 Query 204376 GGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTGTA 204435 || || ||||||||||||| |||| | ||| || ||||| ||| ||| Sbjct 7393 AGGAGTCTTGCCCCACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 7334 Query 204436 CGTCGGATAAGG-CTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAGT 204494 ||| ||||| | || | || || || |||| ||| || || | | || || | Sbjct 7333 TGTCTCGTAAGGACCGAGCTTC-TCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGAT 7275 Query 204495 ACATGGTCTCAAAGATCTGAACGTT 204519 | ||||||||||| ||||| | ||| Sbjct 7274 AGATGGTCTCAAAAATCTGGATGTT 7250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795120044200720