Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2105 255 7e-63 seq3316 120 4e-22 seq2765 114 2e-20 >seq2105 Length=340086 Score = 255 bits (282), Expect = 7e-63 Identities = 478/701 (68%), Gaps = 6/701 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || || ||||| Sbjct 293888 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAAATACCC 293947 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || ||| ||||| || ||||||||||| || || || ||||| || Sbjct 293948 TCCTCGATTGTGAGCAGCGACACATCGAAGGTACCACCACCAAGATCGAAGATGAGCACA 294007 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| ||||||||||| || || || || || ||||| ||| Sbjct 294008 TTGCGCTCGCCCTCAGTCTTCTTGTCGAGACCGTAGGCAATGGCTGCTGCAGTTGGCTCA 294067 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||||||||| | || || || || |||||||| Sbjct 294068 TTGATGATACGGAGGACGTTGAGGCCAGCAATGAGACCGGCGTCCTTTGTTGCTTGTCGC 294127 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 ||||| ||||| || || || || ||||| ||||| |||| |||| | ||| || Sbjct 294128 TGCGAGTCGTTGAAATATGCTGGAACCGTGACGACGGCGTTGTTGACGGTGCCACCAAGG 294187 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 ||||| || ||| | || ||| || || || | ||| | || ||||| || | | Sbjct 294188 TACGACTCTGCGGTCTCACGCATCTTTGTGAGGATCATGGCGGAGATCTCCTCTGGTGTG 294247 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| ||| || || || || || || || | || || |||| | Sbjct 294248 AACTGCTTCTCCTCGCCCTTGAACTCGACCGAGATGACTGGCTT---GCCAGCCTTCTCG 294304 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 || ||||| | | | | ||||| || |||| |||| | ||| ||||| | Sbjct 294305 ATGACCTTGAAGGGGAAGTGCTTCATGTCTGCTTGCACCTCTGCGTCTTGGAACTTGCGG 294364 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| | |||||||| || || ||||||||| ||||||||||| |||||||| Sbjct 294365 CCGATCAATCGCTTTGCGTCGAAGACTGTGTTTGCTGGGTTCATGGCGACCTGGTTCTTG 294424 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | || || || |||||| | || || || || Sbjct 294425 GCGGCATCACCGATCAGACGCTC---GGTGTCTGTGAAGGCGACGAATGAGGGTGTTGTG 294481 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || || ||||| || || || || | ||| || | | ||| || ||||| Sbjct 294482 CGGTTGCCCTGATCGTTGGCGATGATCTCAATGCGATCATCTCTGAAGATACCCACGCAA 294541 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCAT 8157 || ||||| || || || || ||||| |||||| | | ||| Sbjct 294542 GAGTACGTGGTACCCAAGTCGATACCAATTGCTGGTGCCAT 294582 >seq3316 Length=588550 Score = 120 bits (132), Expect = 4e-22 Identities = 208/302 (69%), Gaps = 3/302 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| | ||||||||| || || || || ||||| || ||||| |||| ||| Sbjct 136287 TCGAAATCCTGACCACCCAAATGGGTGTCACCAGCGGTAGCCTTGACAGTGAAGACACCG 136228 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || | ||||| | | || ||||| || ||||||||||| || || | ||||| || Sbjct 136227 CCCTGAATGTGAAGAAGGGAGACATCGAAAGTACCACCACCAAGATCGTAGATGAGGACA 136168 Query 7577 TTCGTATCGTCGTC---TTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 || || | ||| ||| ||||||| || |||||||| || || ||||| Sbjct 136167 TTTCGCTCCTTGTCAGACTTGCCGGAGCCGAGACCATATGCGATAGCAGCGGCAGTTGGC 136108 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || ||| ||| || || || || | | || || || || |||||| Sbjct 136107 TCGTTGATGATGCGGAGAACGTTGAGTCCGGCGATGGCACCAGCGTCCTTGGTGGCTTGT 136048 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 | || |||||| ||||| || ||||| || | ||| || | | ||| ||||| ||| Sbjct 136047 CTCTGGTTATCGTTGAAGTAAGCTGGGACGGTAATGACGGCCTTCTCGACCTTCTTCCCG 135988 Query 7754 AG 7755 || Sbjct 135987 AG 135986 >seq2765 Length=312026 Score = 114 bits (126), Expect = 2e-20 Identities = 241/356 (68%), Gaps = 9/356 (3%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 |||||||| |||||||| | || || || || || || || | || || || | ||| Sbjct 265386 TCGAAATCCTCACCACCAAGATGGGTGTCACCGGCCGTTGCCTGAACCTCGAACACACCC 265327 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTC---AAAAATGAGT 7573 || | | || | || ||||| || ||||||||||| ||||| | ||||| Sbjct 265326 TGGTCGACAGTCAAGATGGAGACATCGAAAGTACCACCACCAAGGTCGTAGACAATGA-- 265269 Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 | ||| || | ||| | |||| ||||| ||||| |||| ||| || || || ||| Sbjct 265268 TCTGGCGT-TCCTTGTC---GGTCTTGTCGAGGCCGTAGGCGAGAGCGGCGGCGGTAGGT 265213 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || | | ||| || ||| || || || || || | || || || || || Sbjct 265212 TCGTTGACGACACGGAGGACGTTGAGACCGGCGATCGTGCCAGCGTCCTTGGTAGCGGCA 265153 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| |||||||| ||||| || ||||| |||| ||||| || | ||| Sbjct 265152 CGCTGGGCGTCGTTGAAGTAGGCTGGGACTGTGACGACTGCGTTGGTGACCTTTTCGCCG 265093 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 || || || || |||| || ||||| ||| || | ||| ||||| | |||||| Sbjct 265092 AGGTATGACTCGGCGACTTCCTTCATCTTGCCCAGGATCATGGATGAGACCTCTTC 265037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635104719191080