Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 93.3 5e-14
>seq3470
Length=143118
Score = 93.3 bits (102), Expect = 5e-14
Identities = 353/542 (65%), Gaps = 24/542 (4%)
Strand=Plus/Plus
Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573
|| ||||| || ||||||||||| || ||| || || | |||||| || | ||||
Sbjct 117115 CCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCGGCCATGAGACCACGTTTC 117174
Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633
|| ||||| ||||| ||| |||| |||||| |||||||||||||| || ||| ||
Sbjct 117175 TTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATGCCCTCAACGGCGGCAAAT 117234
Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC-GAA--CCACTTGAGAGCCCAGTT 119689
|||| ||||| || || |||||| |||||| ||| ||| | |||||||
Sbjct 117235 GCGATGAGACGGAGGGC-GAATGTCGAGTTCTTGTCAGAAATCCATCGCAACGCCCAGTC 117293
Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG------TTGCTTCTT 119743
||||| | ||||| |||| | | |||||| | ||| || | ||| |||
Sbjct 117294 AGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAACAGGTATGTTCGCTGCTT 117353
Query 119744 TTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACCAT 119803
| || || | || ||| |||| ||||| || || ||||| || | |
Sbjct 117354 T--GGC----TCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCGGAGTGGATGTT 117407
Query 119804 -TTCATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTCAG 119862
| ||| || ||| || | || || | || || || | || ||||| || ||
Sbjct 117408 CTCCATCATG-ATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGCACCTC-AGAG 117465
Query 119863 CAAAATTG-TTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAAG 119921
| || | | | || || || ||||| ||||||||| | ||||||||||| | |
Sbjct 117466 CTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAGAATGCGAGG 117525
Query 119922 ATGTACTTTATGAATTTCTGTTCATTATCGTTGAGT---GTTTTCCAGTCGTCCATATCT 119978
| || ||||| |||| | ||||||||| | |||||||||| | |||
Sbjct 117526 ACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCGTGGAGATCC 117585
Query 119979 TTAGACAAGTCCACCTCTTCAGCTGTCCAGTTAGACATCTGTGCCTTTTTATAGAGTTCC 120038
|| |||| || | ||| |||||||||||| || || |||||||| || | || |
Sbjct 117586 TTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTGTACATTTGC 117645
Query 120039 CA 120040
||
Sbjct 117646 CA 117647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588949959898600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |