Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq564 194 2e-44 >seq564 Length=57547 Score = 194 bits (214), Expect = 2e-44 Identities = 890/1394 (64%), Gaps = 31/1394 (2%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | ||||| || || ||||| || ||| |||| ||| || | ||| ||| Sbjct 7542 TAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAAGCCCATGATCTGCGAGGTCGAG 7483 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 ||||||||||| || || | | ||| ||| || | ||| | | ||| || Sbjct 7482 GCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCACACCGTGCTGGGCGATCTTGCCC 7423 Query 106055 TTGAGAACATCCCAGTCGTAGTTGAGCTTGGTTTCAC-CTT--CCCACATATCAAATTGA 106111 ||||| | ||||||| || || | ||| | ||| ||||||| || | || Sbjct 7422 TTGAGTGCGGCCCAGTCCCAG---AGGTCGGTAGGAGTCTTGCCCCACATGTCGTACTGG 7366 Query 106112 AGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTC--AG 106169 ||| | || || || ||||| || ||||||| || | ||| | ||||| || Sbjct 7365 AGCTCGCCCTGCGATACTGGAGAGCCTGGGTATGTCTCGTAAGGACC--GAGCTTCTCAG 7308 Query 106170 CCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | | || || ||||| || | || ||||| ||||| ||||| || | || | Sbjct 7307 CAAGCTCGCATGAAGCCTCAAGAGCAGCATGATAGATGGTCTCAAAAATCTGGATGTTGA 7248 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGAC 106289 ||||||||| ||| || || |||| |||| | || |||| || |||| Sbjct 7247 GCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCGGAGAGCCAAGAAGGCATCAGCAAGAC 7188 Query 106290 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA-ACG 106348 | | ||||| | |||||| |||| ||| || | || |||||| || ||| || Sbjct 7187 CGTTGACACCAAGACCAATGGGTCGGTGGCGGAAGTTGCTCTTTCGTGCC-TCTGGTACC 7129 Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408 || || | || | || ||| ||| || || || || | || |||| || Sbjct 7128 GGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGTTACGTGTGACCACTTTGGTGACCTCG 7069 Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATT 106468 |||||||| | | |||||| |||| | ||| || | || || || | Sbjct 7068 TGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGATGTCGACGTAGGTGGGCAGAGCAAGC 7009 Query 106469 GATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACAC 106528 || |||| |||||| ||||| ||||||| | | | |||||| | || || || ||| Sbjct 7008 GAAGCCAGATTGCAGACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCAC 6949 Query 106529 AAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCC 106588 || || || ||||| || || || | |||||| ||||| ||||| |||| || ||| Sbjct 6948 AAATTAGAGCTCTTGATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCC 6889 Query 106589 TTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACA 106648 ||||| || ||| | || || || ||||| ||||| | || |||||| || | ||| | Sbjct 6888 TTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATT 6829 Query 106649 TCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGC 106707 | || | || | | ||||| | ||| | | ||| || ||| || | Sbjct 6828 TTCTGAGCACGAACCGTCTCAC-GGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTC 6770 Query 106708 TTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAG 106766 | ||||| ||||| | || || ||||| || || || || || || | |||| Sbjct 6769 CTTGAACTCGTCACCGTAGACATCCGACAGACCAGG-GCATTCGTTGGGGCACATTAGAG 6711 Query 106767 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAA 106826 ||| || || || || |||| ||| || || || |||||||| || | | | Sbjct 6710 TCCAAGTGCCGTTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGA 6651 Query 106827 AGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCA 106886 | | ||| | ||| | ||||| | || ||||| || | || | ||||| || Sbjct 6650 ACAAATCGCGCGCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCA 6591 Query 106887 TGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------C 106940 ||| || |||||||| |||||||| |||| || | || || | ||||| | Sbjct 6590 TGACGTCTGCGTGCCACGGCTCAAGGTAGATGGCAAAAGCACC---TGGACGCTTGTTGC 6534 Query 106941 CAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCAT 107000 || | || | || || || || ||| ||| | || || |||||||| | || ||| | Sbjct 6533 CACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGT 6474 Query 107001 CTGATTGACCATTTGTCCCCCGAAT--ACGAGATTTATTGGCTCTCACATCATGGATGTG 107058 ||| || ||||| || | ||| | ||| | | || || | | || | || Sbjct 6473 TGGATGTGCCGTTTGTGCCGCCAATGTATGAGCCTG--TAGCCCTGATGTTGTGAACATG 6416 Query 107059 CATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGAT 107118 | |||||||| ||||| ||| ||||| ||||| | | || || | ||||| Sbjct 6415 AAGACCAATACCGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGAT 6356 Query 107119 ACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGG 107178 ||| | || ||| ||||| |||| | | |||||| | | ||||| ||| Sbjct 6355 ACCATCAATGCTGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGG 6296 Query 107179 TGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG-GACATCTTGT 107237 ||||||||| |||| || ||||| | || || |||| ||| | ||||| | || Sbjct 6295 GGTACCAGCACTGAAAAGTGTTGGCGAAGCATGTGTGAAG-TACTTCAACGACATGTAGT 6237 Query 107238 CGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAA 107297 ||||||||| | | | ||||||||||||||||| ||||||| ||||||||||| | Sbjct 6236 TGTATGTCTCGATCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACACGCATGA 6177 Query 107298 ACATGTATTGGGGT 107311 ||| | ||| ||| Sbjct 6176 TCATCTGTTGCGGT 6163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589954715473880