Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq1109 104 8e-18 >seq1109 Length=1760699 Score = 104 bits (114), Expect = 8e-18 Identities = 219/327 (67%), Gaps = 0/327 (0%) Strand=Plus/Plus Query 211 TGACTATAATCCAGACGTCCTTGAAACTTTCCCTAACAAACATCCTGAAAATAATTACCT 270 ||| ||| |||||| | | | || | |||| |||||| || || | | |||| | Sbjct 1387720 TGAATATGATCCAGGCATTTTAGAGAATTTCGATAACAAGCACCCGTACCGTGATTATTT 1387779 Query 271 AGTAACATTTGACGGATATGAATTCACTTCCCTTTGCCCTAAAACAGGACAGCCTGACTT 330 || | ||| || | || ||||| || ||||| | || || ||||| ||||| Sbjct 1387780 TGTCAAATTCAACTGCCCCGAGTTCACCAGTCTGTGCCCGATTACGGGTCAGCCAGACTT 1387839 Query 331 CGCGAATGTTTTCATTAGTTACATTCCAAACGAAAAGATGGTTGAATCTAAATCATTGAA 390 || | ||| ||||| ||||| || | | ||| ||||| || || || | || Sbjct 1387840 TGCAACCATTTATATTAGCTACATCCCTGATGTAAAAATGGTAGAGAGCAAGTCTCTTAA 1387899 Query 391 ATTGTACTTATTCAGTTTCCGTAACCACGGTGACTTCCACGAAGATTGCATGAACATTAT 450 ||||| | ||||| ||||| ||||| || || |||||||| ||||| ||||||| || Sbjct 1387900 GCTGTACCTGTTCAGCTTCCGCAACCATGGAGATTTCCACGAGGATTGTGTGAACATCAT 1387959 Query 451 TTTGAATGACTTGTATGAATTGATGGAACCTAAGTACATTGAAGTCATGGGCCTATTCAC 510 |||| ||| || | | ||||||| || ||||||||||| |||| ||| || Sbjct 1387960 CATGAACGACCTGATTAAGCTGATGGACCCGCGCTACATTGAAGTGTGGGGCAAATTTAC 1388019 Query 511 TCCTCGTGGTGGAATTTCAATTTACCC 537 || || || || || || || |||| Sbjct 1388020 GCCGCGCGGAGGCATCTCCATCGACCC 1388046 Score = 84.2 bits (92), Expect = 8e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 1930 ATGCCTATCATGGAAATTTTCGGTCCTACAATTCAAGGTGAAGGAATGGTTATAGGTCAA 1989 || ||| | ||||| || || || || || ||||||||||||| ||||| || || || Sbjct 1386813 ATTCCTGTAATGGAGATCTTTGGCCCGACGGTTCAAGGTGAAGGTATGGTCATTGGGCAG 1386872 Query 1990 AAGACTATTTTCATTCGAACTGGTGGATGCGACTATCATTGCAACTGGTGTGACTCAGCC 2049 || || || ||| | || || | || ||||| |||| ||| |||||| ||||| ||| Sbjct 1386873 AAAACGATGTTCGTCCGCACCGCGGGCTGCGATTATCGCTGCTCCTGGTGCGACTCTGCC 1386932 Query 2050 TTTACCTGGAACGG 2063 || || ||| |||| Sbjct 1386933 TTCACATGGGACGG 1386946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180690010361992