Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq2765 95.1 2e-14 >seq2765 Length=312026 Score = 95.1 bits (104), Expect = 2e-14 Identities = 170/246 (69%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 197406 CTCTCTGAAGCTCTTGTTGACCTGAGACACTCCGTTCATGTACAACACGTCAAAAGCAAA 197465 ||||| ||| || || ||| | | | | ||||| | ||| | | ||| || ||||| Sbjct 89257 CTCTCGGAACGGTTTATTCACCAGCGCCTCGCCGTTGAGGTAGAGGATGTCGAATGCAAA 89316 Query 197466 GACGCACACCTGGACGGTTATCTCTTCTTCCTTGACATCTTTACGTTTTCTG-GTCGCCA 197524 || ||||| | ||| | || ||||| |||||| || || | ||||| | ||| | Sbjct 89317 CACACACACTTTGACTTTGATGTCTTCGGTCTTGACGTCCTT-CTTTTTCCGTGTCATGA 89375 Query 197525 GCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAACGTCCCAAGCAACTGCCTCAGCGTCCA 197584 ||| ||| || || |||| |||||||||||||| ||||| || || | |||| ||| | Sbjct 89376 GCTGTTGGAAAGGCAGGACATGCTTCTTCTCAACATCCCAGGCGACAGTCTCACAGTCGA 89435 Query 197585 AGATGAAAGACTTCACTCCCTCGTTGATCGATTGGGGAAGCCTATTGATTATGTCGGGGT 197644 | ||| || | ||||| |||| | | | || || || | || |||||||||| Sbjct 89436 GCACGAAGCTCTGGATTCCCTGCTTGACCCACTTTGGTAGTCTCTCGAGGATGTCGGGGT 89495 Query 197645 ACTTCT 197650 |||||| Sbjct 89496 ACTTCT 89501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676699680092560