Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_019487.1
Length=143986
Score E
Sequences producing significant alignments: (Bits) Value
seq2872 143 2e-29
>seq2872
Length=271093
Score = 143 bits (158), Expect = 2e-29
Identities = 157/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 35541 CGGCGTAATTCCACATCCTTTAAATCGTTCTTATGAAGATTCGTCCTATGTAGTCGCATA 35600
||||| | || ||||||||| | |||| |||||| | ||| ||| |||| | |||||
Sbjct 135704 CGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATGCAAATTGGTCATATGCACCCGCATG 135645
Query 35601 CCACACCCGATGTCACTTCCAACGATGGATGGTGAAATGAACCCATCTTTAGCATTCCAA 35660
||||| ||||||||||| || ||||||||||| || | || ||| || |||| |||
Sbjct 135644 CCACAGCCGATGTCACTGCCTACGATGGATGGAGATACAAATCCACTCTTGGCATCCCAT 135585
Query 35661 ACAGCAGTAGTCCCTATACAAGTACCTACTCCAACATGCGCGTCCGGCGTGTAGCTCATA 35720
|| ||||| || || || || |||||||| || |||||| | || |||||||| ||||||
Sbjct 135584 ACCGCAGTTGTGCCGATGCAGGTACCTACACCGACATGCACATCAGGCGTGTAACTCATA 135525
Query 35721 TGAACATTACGAGGTATTTGTAGGTTATT 35749
| | ||| || ||||| || || ||
Sbjct 135524 TAGGAAATACCCGGGATTTGAAGATTGTT 135496
Score = 122 bits (134), Expect = 8e-23
Identities = 374/567 (66%), Gaps = 11/567 (2%)
Strand=Plus/Minus
Query 34395 GCTCCTTTCACAACAACTAATGGTTTACAAACTGCTACTACTGAAGCAAGTTTCGCTCCT 34454
||||| |||||| | | | ||||||||| ||||| ||| ||| || || ||
Sbjct 136802 GCTCCCTTCACAGCGGCAAGTGGTTTACATTTGGCTACAACTTGAGCCAGACCTGCACCG 136743
Query 34455 ACTACAGAATCAATAATTTGGTCGACATCCTTGTAAGCTTGAGGACACTCATCTAAGATA 34514
||| ||| ||||||| ||||||| || || ||||| || | ||||||| ||
Sbjct 136742 GTCACACTATCCATAATTTCATCGACATTTTTATACGCTTGCGGCGATTCATCTATAATG 136683
Query 34515 GTCTCGAGAGACTTCTGGTTGACTACAATCTCATCGTCTTCTCCAACTCTCAAGCTCTTA 34574
| || || || |||||| || ||||||||||| || || || | || || | |
Sbjct 136682 GATTCAAGTGAACGCTGGTTCACCACAATCTCATCTTCAGTCCCCACGCCCA-GCGCCGA 136624
Query 34575 G-CAAACTCGTCAACCGTAACGAC-CTCTCTTGTAGCTCGACGACTACGAACACGACCAG 34632
| |||| || || || ||||| | | || |||| ||| ||| ||||| || || |
Sbjct 136623 GGCAAAATCCTCCACGGTAACCAGGCGCT-TTGTTGCTGTACGCGAACGAATGCGTCCTG 136565
Query 34633 CCCCATGACAGATAGAATAAAAGTTCTTTACACCCTCGTCTTTACCAAGCATAATGTAGC 34692
||||||||||||| |||||| | || | |||||| || || | ||| || ||
Sbjct 136564 CCCCATGACAGATTGAATAATAATTATCCTTCCCCTCGGGTTGGCCTACCATGATATATG 136505
Query 34693 TTGACGTCCCCATAGAGCCCGGAATAAGCGCCGGGTGTCCAGTTTCCTTAAACACCTTTG 34752
| |||||||| || || |||||||| || || || || ||| || | | ||| |
Sbjct 136504 AAGCAGTCCCCATTGAACCAGGAATAAGTGCGGGATGACCTGTTGCCAGATATGGCTTCG 136445
Query 34753 GGTTTAAATGGTGTCCAGCCGGAAGAGCTCTTGTAGCTCCTTTACGATGTACGATATGCG 34812
| || | || || || || | || | |||||||||||| || ||||| | | |
Sbjct 136444 GATTATCCGGATGACCTGCAGGCAATGCACGTGTAGCTCCTTTGCGGTGTAC-AAAAACC 136386
Query 34813 GAGAGTT--TC--TATGAAACTCGACTTGAGCATAGTTATGCATAAGATCATATAAAAGC 34868
|| || || || | || | |||||||| ||||| |||||||| | |
Sbjct 136385 GACCCTTGATCCGCGTGCGATTCCTCCCATGCATAGTTGTGCATCAGATCATA-GAGGGT 136327
Query 34869 TCAGTTTCCACATGTT-CACCCATAACATCCCGGAAAGCTTGGGATACACCATACGCAAT 34927
| | | | ||| || ||| | |||||||| ||||||| | | ||||||||||
Sbjct 136326 GCGGAATTCGCATTTTGGACCAAAGACATCCCGAAAAGCTTCGCGAATCGCATACGCAAT 136267
Query 34928 CATATGACGGTTCGCAACAGCGTAGTT 34954
|| ||| || ||||| || || || ||
Sbjct 136266 CAGATGGCGATTCGCTACGGCATAATT 136240
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 460606834519920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |