Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_019487.1 Length=143986 Score E Sequences producing significant alignments: (Bits) Value seq2872 143 2e-29 >seq2872 Length=271093 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 35541 CGGCGTAATTCCACATCCTTTAAATCGTTCTTATGAAGATTCGTCCTATGTAGTCGCATA 35600 ||||| | || ||||||||| | |||| |||||| | ||| ||| |||| | ||||| Sbjct 135704 CGGCGCAGTTTCACATCCTTCAGGTCGTCCTTATGCAAATTGGTCATATGCACCCGCATG 135645 Query 35601 CCACACCCGATGTCACTTCCAACGATGGATGGTGAAATGAACCCATCTTTAGCATTCCAA 35660 ||||| ||||||||||| || ||||||||||| || | || ||| || |||| ||| Sbjct 135644 CCACAGCCGATGTCACTGCCTACGATGGATGGAGATACAAATCCACTCTTGGCATCCCAT 135585 Query 35661 ACAGCAGTAGTCCCTATACAAGTACCTACTCCAACATGCGCGTCCGGCGTGTAGCTCATA 35720 || ||||| || || || || |||||||| || |||||| | || |||||||| |||||| Sbjct 135584 ACCGCAGTTGTGCCGATGCAGGTACCTACACCGACATGCACATCAGGCGTGTAACTCATA 135525 Query 35721 TGAACATTACGAGGTATTTGTAGGTTATT 35749 | | ||| || ||||| || || || Sbjct 135524 TAGGAAATACCCGGGATTTGAAGATTGTT 135496 Score = 122 bits (134), Expect = 8e-23 Identities = 374/567 (66%), Gaps = 11/567 (2%) Strand=Plus/Minus Query 34395 GCTCCTTTCACAACAACTAATGGTTTACAAACTGCTACTACTGAAGCAAGTTTCGCTCCT 34454 ||||| |||||| | | | ||||||||| ||||| ||| ||| || || || Sbjct 136802 GCTCCCTTCACAGCGGCAAGTGGTTTACATTTGGCTACAACTTGAGCCAGACCTGCACCG 136743 Query 34455 ACTACAGAATCAATAATTTGGTCGACATCCTTGTAAGCTTGAGGACACTCATCTAAGATA 34514 ||| ||| ||||||| ||||||| || || ||||| || | ||||||| || Sbjct 136742 GTCACACTATCCATAATTTCATCGACATTTTTATACGCTTGCGGCGATTCATCTATAATG 136683 Query 34515 GTCTCGAGAGACTTCTGGTTGACTACAATCTCATCGTCTTCTCCAACTCTCAAGCTCTTA 34574 | || || || |||||| || ||||||||||| || || || | || || | | Sbjct 136682 GATTCAAGTGAACGCTGGTTCACCACAATCTCATCTTCAGTCCCCACGCCCA-GCGCCGA 136624 Query 34575 G-CAAACTCGTCAACCGTAACGAC-CTCTCTTGTAGCTCGACGACTACGAACACGACCAG 34632 | |||| || || || ||||| | | || |||| ||| ||| ||||| || || | Sbjct 136623 GGCAAAATCCTCCACGGTAACCAGGCGCT-TTGTTGCTGTACGCGAACGAATGCGTCCTG 136565 Query 34633 CCCCATGACAGATAGAATAAAAGTTCTTTACACCCTCGTCTTTACCAAGCATAATGTAGC 34692 ||||||||||||| |||||| | || | |||||| || || | ||| || || Sbjct 136564 CCCCATGACAGATTGAATAATAATTATCCTTCCCCTCGGGTTGGCCTACCATGATATATG 136505 Query 34693 TTGACGTCCCCATAGAGCCCGGAATAAGCGCCGGGTGTCCAGTTTCCTTAAACACCTTTG 34752 | |||||||| || || |||||||| || || || || ||| || | | ||| | Sbjct 136504 AAGCAGTCCCCATTGAACCAGGAATAAGTGCGGGATGACCTGTTGCCAGATATGGCTTCG 136445 Query 34753 GGTTTAAATGGTGTCCAGCCGGAAGAGCTCTTGTAGCTCCTTTACGATGTACGATATGCG 34812 | || | || || || || | || | |||||||||||| || ||||| | | | Sbjct 136444 GATTATCCGGATGACCTGCAGGCAATGCACGTGTAGCTCCTTTGCGGTGTAC-AAAAACC 136386 Query 34813 GAGAGTT--TC--TATGAAACTCGACTTGAGCATAGTTATGCATAAGATCATATAAAAGC 34868 || || || || | || | |||||||| ||||| |||||||| | | Sbjct 136385 GACCCTTGATCCGCGTGCGATTCCTCCCATGCATAGTTGTGCATCAGATCATA-GAGGGT 136327 Query 34869 TCAGTTTCCACATGTT-CACCCATAACATCCCGGAAAGCTTGGGATACACCATACGCAAT 34927 | | | | ||| || ||| | |||||||| ||||||| | | |||||||||| Sbjct 136326 GCGGAATTCGCATTTTGGACCAAAGACATCCCGAAAAGCTTCGCGAATCGCATACGCAAT 136267 Query 34928 CATATGACGGTTCGCAACAGCGTAGTT 34954 || ||| || ||||| || || || || Sbjct 136266 CAGATGGCGATTCGCTACGGCATAATT 136240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 460606834519920