Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq564 253 4e-62
seq3470 230 4e-55
>seq564
Length=57547
Score = 253 bits (280), Expect = 4e-62
Identities = 969/1506 (64%), Gaps = 43/1506 (3%)
Strand=Plus/Minus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||||| | |||| |||||| || || | | | |||||| ||||| | | ||| |
Sbjct 7795 GTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTT 7736
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
| |||| || |||||| ||||||||| ||| | | |||||||| ||||| | | |||
Sbjct 7735 ACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGG 7676
Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCG 212867
|||| ||| | || || || |||||| || | ||| ||||| |||
Sbjct 7675 GATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCT 7624
Query 212868 TTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926
||| ||||| | |||| | || ||| | || |||||||| | |||||| ||
Sbjct 7623 GACCACAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTC 7565
Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986
|| | | ||| | | ||||| ||| ||||| ||||||| || ||||||
Sbjct 7564 GCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAA 7505
Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046
|||| ||||| | || |||||| ||||| || || || || || ||| | |||
Sbjct 7504 GCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCAC 7445
Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106
||||||| | |||| || | || | ||||||||||| | | | |||
Sbjct 7444 ACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA---- 7390
Query 213107 GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166
||| | | | |||||||| |||| | ||| | || || ||| ||||
Sbjct 7389 GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 7334
Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226
| ||| || || ||| || || |||||||| || |||| || ||||| | ||
Sbjct 7333 TGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATA 7274
Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286
|||||| ||||| |||| ||||||||| ||||||||| || || ||| |||||
Sbjct 7273 GATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCG 7214
Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346
| ||| ||||||| || || | ||| || | || ||||||| ||| | |
Sbjct 7213 GAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAA 7154
Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405
||| ||| | || ||| | ||||| ||||| |||||| ||||||| ||||
Sbjct 7153 GTTGCTCTTTCGTGC-CTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGT 7095
Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465
| || ||| ||||||||||||| | | || | || | | || || | | | ||
Sbjct 7094 TACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGA 7035
Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525
| || | ||||| || | ||||| ||||| || || ||||| | |
Sbjct 7034 TGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAG 6975
Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585
| | ||||||||||||||| ||||||| || || ||||||||| || |||| |
Sbjct 6974 CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCT 6915
Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645
|||| ||| |||||| | |||||||| || ||| | || | |||||||| ||
Sbjct 6914 GGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCT 6855
Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGG 213705
| | | | || || ||| | | | || || | ||| || || || | |
Sbjct 6854 GCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCTTG 6799
Query 213706 GCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764
| | | ||| || | ||||| ||||| ||||| |||| || |||| |||
Sbjct 6798 CCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGA 6739
Query 213765 CCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATG 213824
|| || || ||| ||||| || |||| |||| | | ||| | ||||||
Sbjct 6738 CCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATA 6679
Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884
|| || || || | ||| || ||| ||||| || | | | || ||| ||||
Sbjct 6678 AAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCA 6619
Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944
||| ||||| || || | || | | || ||| |||||||||||||| | |||||||
Sbjct 6618 TGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATG 6559
Query 213945 GCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAG 214001
||||| || || || | |||| || |||||||| || | || ||||| ||
Sbjct 6558 GCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAG 6499
Query 214002 ATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCC 214060
| || || | ||||| || |||||||| ||| ||||| || || | || || |||||
Sbjct 6498 ACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAGCC 6440
Query 214061 GGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118
| ||||| | |||| |||| ||| || || || || |||| |||||||||||||
Sbjct 6439 TGTAGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATG 6382
Query 214119 GCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAG 214178
|| || | | | || || ||| || | ||||||||||| | | | || ||||
Sbjct 6381 GCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAG 6322
Query 214179 AAGCAG 214184
||||||
Sbjct 6321 AAGCAG 6316
>seq3470
Length=143118
Score = 230 bits (254), Expect = 4e-55
Identities = 567/854 (66%), Gaps = 16/854 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || | ||||| |||||||| ||||| || ||| ||| ||||||||
Sbjct 116805 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 116864
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956
||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| |
Sbjct 116865 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 116919
Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013
|| | |||| |||||| | || ||||||| |||||||||| |||||| || |
Sbjct 116920 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 116979
Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073
|| || | ||| | ||| | ||||||| ||| ||| ||||| || |
Sbjct 116980 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATG 117039
Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133
|| || || ||| || || ||||| ||| ||| | | || | ||||
Sbjct 117040 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 117096
Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193
|| ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| ||
Sbjct 117097 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 117156
Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253
| ||||| || | | || |||||||| || || || ||||| |||||||||||||||
Sbjct 117157 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATG 117216
Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313
||||| || || || || ||| |||| | |||| | | ||||||||| || |||
Sbjct 117217 CCCTCAACGGCGGCAAATGCGATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 117276
Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373
|| | ||||||||| |||||| | ||||||||| || | || ||||| |||
Sbjct 117277 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 117336
Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
|| | | | || || || | || ||| || || | || ||||
Sbjct 117337 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 117396
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || ||||||||| ||||||||| | ||||| | ||||
Sbjct 117397 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 117456
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | | ||| | ||| | || ||||| ||||| || ||||| || || || |||
Sbjct 117457 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 117516
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610
|| || ||||| ||| | ||| || |||| || | |||| || |||||| |
Sbjct 117517 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 117576
Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670
|| | || || ||| || | || || | |||||||| || || || ||||||
Sbjct 117577 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 117636
Query 48671 TACATGCCCCATAT 48684
||||| ||||||
Sbjct 117637 TACATTTGCCATAT 117650
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931491614606080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |