Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07- 28] 3,537 sequences; 43,616,279 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq564 253 4e-62 seq3470 230 4e-55 >seq564 Length=57547 Score = 253 bits (280), Expect = 4e-62 Identities = 969/1506 (64%), Gaps = 43/1506 (3%) Strand=Plus/Minus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||||| | |||| |||||| || || | | | |||||| ||||| | | ||| | Sbjct 7795 GTTCAAGCTCTGAGACTGGTCGATAAAAGCACCACGGTCAGCAGCCATCTGCACGATGTT 7736 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | |||| || |||||| ||||||||| ||| | | |||||||| ||||| | | ||| Sbjct 7735 ACGCTGGCTGATCTCCCAGACGGTCTTGTAGAGTGCCTTGAGGTCGTCTGGAATGTTGGG 7676 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGC--TGCAGGCG------CATGTCCTCG 212867 |||| ||| | || || || |||||| || | ||| ||||| ||| Sbjct 7675 GATGCGCTGAATGGAGCC-------ATTGTCAGCGATG-ATGCGGTTCTTCATGTTCTCT 7624 Query 212868 TTCCAGAGGCCCCTGGTCTCC-AGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTC 212926 ||| ||||| | |||| | || ||| | || |||||||| | |||||| || Sbjct 7623 GACCACAGGCCAC-GGTCGACGAGATCCTTCAGAAGCCATGGGTTGACGACCTGGAACTC 7565 Query 212927 ACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTT 212986 || | | ||| | | ||||| ||| ||||| ||||||| || |||||| Sbjct 7564 GCCAGCCAACACACGACGAGAGTAAATGTTGCTTGTGTATGGCTCGAAGCACTCGTTAAA 7505 Query 212987 CCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCAC 213046 |||| ||||| | || |||||| ||||| || || || || || ||| | ||| Sbjct 7504 GCCCATGATCTGCGAGGTCGAGGCTGTTGGCATCGGCGCAACGAGAAGCGAGTTGCGCAC 7445 Query 213047 TCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTC 213106 ||||||| | |||| || | || | ||||||||||| | | | ||| Sbjct 7444 ACCGTGCTGGGCGATCTTGCCCTTGAGTGCGGCCCAGTCCCAGAGGTCGGT-AGGA---- 7390 Query 213107 GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166 ||| | | | |||||||| |||| | ||| | || || ||| |||| Sbjct 7389 GTCTTGCCC----CACATGTCGTACTGGAGCTCGCCCTGCGATACTGGAGAGCCTGGGTA 7334 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | ||| || || ||| || || |||||||| || |||| || ||||| | || Sbjct 7333 TGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAAGCCTCAAGAGCAGCATGATA 7274 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 |||||| ||||| |||| ||||||||| ||||||||| || || ||| ||||| Sbjct 7273 GATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGAATGGCATGCG 7214 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 | ||| ||||||| || || | ||| || | || ||||||| ||| | | Sbjct 7213 GAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGCGGAA 7154 Query 213347 GTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| ||| | || ||| | ||||| ||||| |||||| ||||||| |||| Sbjct 7153 GTTGCTCTTTCGTGC-CTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCAGGT 7095 Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT 213465 | || ||| ||||||||||||| | | || | || | | || || | | | || Sbjct 7094 TACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCTCGA 7035 Query 213466 CCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGT 213525 | || | ||||| || | ||||| ||||| || || ||||| | | Sbjct 7034 TGTCGACGTAGGTGGGCAGAGCAAGCGAAGCCAGATTGCAGACAGCGACCTCATCCGGAG 6975 Query 213526 CTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGT 213585 | | ||||||||||||||| ||||||| || || ||||||||| || |||| | Sbjct 6974 CAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTGATGGTGCCAAGATTCTTCT 6915 Query 213586 GGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCT 213645 |||| ||| |||||| | |||||||| || ||| | || | |||||||| || Sbjct 6914 GGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAAGGTGTGCCGGTCTCGGTCT 6855 Query 213646 GGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGG 213705 | | | | || || ||| | | | || || | ||| || || || | | Sbjct 6854 GCGCCTCGAGAATAGCATACCATATTTTCTGAGC----ACGAACCGTCTCACGGCCCTTG 6799 Query 213706 GCGTAGC-CTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGT 213764 | | | ||| || | ||||| ||||| ||||| |||| || |||| ||| Sbjct 6798 CCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGTCACCGTAGACATCCGACAGA 6739 Query 213765 CCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATG 213824 || || || ||| ||||| || |||| |||| | | ||| | |||||| Sbjct 6738 CCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCCGTTCTGTTCGACACGCTGCATA 6679 Query 213825 AACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCA 213884 || || || || | ||| || ||| ||||| || | | | || ||| |||| Sbjct 6678 AAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGCGCACGAACTTCTTCCTTTCCA 6619 Query 213885 GAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATG 213944 ||| ||||| || || | || | | || ||| |||||||||||||| | ||||||| Sbjct 6618 TGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCGTGCCACGGCTCAAGGTAGATG 6559 Query 213945 GCAAAGGCGCCCGGCCTCTTG---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAG 214001 ||||| || || || | |||| || |||||||| || | || ||||| || Sbjct 6558 GCAAAAGCACCTGGACGCTTGTTGCCACCCTGGTCAACGTAACGTGCAGTGTTGTTGTAG 6499 Query 214002 ATGCGCAGGACGGGTACCAGCCCGTTGGACTGT-CCGTTGGTTCCCGCTATATACGAGCC 214060 | || || | ||||| || |||||||| ||| ||||| || || | || || ||||| Sbjct 6498 ACTCGTAGCATTGGTACAAGACCGTTGGA-TGTGCCGTTTGTGCCGCCAATGTATGAGCC 6440 Query 214061 GGAGGCCCTCAGGTTGCT--CATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118 | ||||| | |||| |||| ||| || || || || |||| ||||||||||||| Sbjct 6439 TGTAGCCCTGATGTTGTGAACATGAAGA--CCAATACCGCCAGCGTTCTTGGAGATCATG 6382 Query 214119 GCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAG 214178 || || | | | || || ||| || | ||||||||||| | | | || |||| Sbjct 6381 GCACATATCTTGAGGGTGTCGTAGATACCATCAATGCTGTCATCCTTCATGGCCACCAAG 6322 Query 214179 AAGCAG 214184 |||||| Sbjct 6321 AAGCAG 6316 >seq3470 Length=143118 Score = 230 bits (254), Expect = 4e-55 Identities = 567/854 (66%), Gaps = 16/854 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || | ||||| |||||||| ||||| || ||| ||| |||||||| Sbjct 116805 CTGGTACTCGCCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGCGAAATGTTCTC 116864 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGC 47956 ||||||| ||||||||||| | ||| || | | | ||| ||| | || ||| | Sbjct 116865 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTCTTGTT--GCCGA---GTGCCAAC 116919 Query 47957 AG---GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATG 48013 || | |||| |||||| | || ||||||| |||||||||| |||||| || | Sbjct 116920 AGTAGGCGATCGGCGACGAATTCAATGTATTGTGACATGAGGCCAGCGTTCATCCCCAGA 116979 Query 48014 AGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACA 48073 || || | ||| | ||| | ||||||| ||| ||| ||||| || | Sbjct 116980 AGCTTGCATGGAAGAGCGTCTGTCAAGAACTCCTGCTCAATCGTGACGGCCTCGGTAATG 117039 Query 48074 ATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAG 48133 || || || ||| || || ||||| ||| ||| | | || | |||| Sbjct 117040 ATGCTCTGCACAAGGGCCTGGTTCGGCTTGTTCTTCAGATGCGAGA---ACAGAAGGCAG 117096 Query 48134 GCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCA 48193 || ||||| |||||| ||| || || ||| ||||||| |||| ||||| ||| || Sbjct 117097 GCGAAGTCTGTGTGCATGCCCTCATCACGGGAGATGAGCTCGTTCGAGAATGTGAGCCCG 117156 Query 48194 GGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATG 48253 | ||||| || | | || |||||||| || || || ||||| ||||||||||||||| Sbjct 117157 GCCATGAGACCACGTTTCTTCAGCCAGAAGATAGCAGCAAAAGATCCAGAGAAGAAGATG 117216 Query 48254 CCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATC 48313 ||||| || || || || ||| |||| | |||| | | ||||||||| || ||| Sbjct 117217 CCCTCAACGGCGGCAAATGCGATGAGACGGAGGGCGAATGTCGAGTTCTTGTCAGAAATC 117276 Query 48314 CAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAG 48373 || | ||||||||| |||||| | ||||||||| || | || ||||| ||| Sbjct 117277 CATCGCAACGCCCAGTCAGCCTTCCTGCGGATGCATGGGATGTTGTCGATGGCATTGAAC 117336 Query 48374 AGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 || | | | || || || | || ||| || || | || |||| Sbjct 117337 AGGTATGTTCGCTGCTTTGGCTCGCTGATGTATGTATCGATGAGAAGGGAATATGTCTCG 117396 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || ||||||||| ||||||||| | ||||| | |||| Sbjct 117397 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGTGCCTCCGGGATCTGC 117456 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | | ||| | ||| | || ||||| ||||| || ||||| || || || ||| Sbjct 117457 ACCTCAGAGCTGAAGCGCTCGACGAGGTTCTCGTTGACAATGCCATCGGATGCGGCGAAG 117516 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAG-AGC--ATTCCAGCCC 48610 || || ||||| ||| | ||| || |||| || | |||| || |||||| | Sbjct 117517 AATGCGAGGACGTGTGAGATGAAGAATCGTTCGTCGTCGTTGAGTCGCTTGTTCCAGTCG 117576 Query 48611 TGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTG 48670 || | || || ||| || | || || | |||||||| || || || |||||| Sbjct 117577 TGGAGATCCTTCGACAGATCAATCTCCTCAGCTGTCCAGAATGAGGCCTCGGCCTTTTTG 117636 Query 48671 TACATGCCCCATAT 48684 ||||| |||||| Sbjct 117637 TACATTTGCCATAT 117650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931491614606080