Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq3470 176 8e-39
seq564 168 1e-36
>seq3470
Length=143118
Score = 176 bits (194), Expect = 8e-39
Identities = 560/862 (65%), Gaps = 34/862 (4%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|||||| | |||||||| ||||| | |||| |||||| || || ||||||||||||
Sbjct 117650 ATATGGCAAATGTACAAAAAGGCCGAGGCCTCATTCTGGACAGCTGAGGAGATTGATCTG 117591
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGA-GCAGCATT-TTC-TCAAG 25593
| ||||| | ||| |||| || | | ||| ||||| | | ||| ||| ||
Sbjct 117590 TCGAAGGATCTCCACGACTGGAACAAGCGACTCAACGACGACGAACGATTCTTCATCTCA 117531
Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | |||||||| || || || ||||| || || |||||||| || |||| |
Sbjct 117530 CACGTCCTCGCATTCTTCGCCGCATCCGATGGCATTGTCAACGAGAACCTCGTCGAGCGC 117471
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| | || |||||| | |||||| || |||||||| |||||||| ||
Sbjct 117470 TTCAGCTCTGAGGTGCAGATCCCGGAGGCACGATGCTTCTACGGCTTCCAGATCATGATG 117411
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTA--CAGACG 25768
|| || | ||||| ||| ||| || ||||| || || ||||| | || |
Sbjct 117410 GAGAACATCCACTCCGAGACATATTCC---CTTCTCATCGATACATACATCAGCGAGCCA 117354
Query 25769 TCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
|| | || | || ||||| ||||||||| |||| || ||||| |||||||
Sbjct 117353 AAGCAGCGA-ACAT-ACCTGTTCAATGCCATCGACAACATCCCATGCATCCGCAGGAAGG 117296
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
| ||||| || ||||| | ||| | | || || | | || || | |
Sbjct 117295 CTGACTGGGCGTTGCGATGGATTTCTGACAAGAACTCGACATTCGCCCTCCGTCTCATCG 117236
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
| ||||| || || ||||||||||| ||| || || ||||| || ||||||||||| |
Sbjct 117235 CATTTGCCGCCGTTGAGGGCATCTTCTTCTCTGGATCTTTTGCTGCTATCTTCTGGCTGA 117176
Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
|| | | | || | |||| ||||||| || || |||||||||||| | | || |||
Sbjct 117175 AG-AAACGTGGTCTCATGGCCGGGCTCACATTCTCGAACGAGCTCATCTCCCGTGATGAG 117117
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCT 26067
|| | |||| ||| || |||||||| || | | || || || |||| ||
Sbjct 117116 GGCATGCACACAGACTTCGCCTGCCTTCTGTTCTCG---CATCTGAAGAACAAGCCGAAC 117060
Query 26068 CAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNN 26127
|| | || | || ||||| | ||||| || ||| ||| |||||||
Sbjct 117059 CAGGCCCTTGTGCAGAGCATCATTACCGAGGCCGTCACGATTGAGCAGGAGTTCTTGACA 117000
Query 26128 NNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAG 26187
|||| |||||| | |||||| |||||||||||
Sbjct 116999 GACGCTCTTCCATGCAAGCTTCTGGGGATGAACGCTGGCCTCATGTCACAATACATTGAA 116940
Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCG----CCAGA--CTCTACAGTACG 26241
| || ||||| | || |||| ||| ||||| | ||| |||||| |||
Sbjct 116939 TTCGTCGCCGATCGCCTACTGT------TGGCACTCGGCAACAAGAAGTTCTACA--ACG 116888
Query 26242 C--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTG 26299
| | ||||| |||||||| ||||| ||||| ||| ||| || |||||||||||||| |
Sbjct 116887 CCACCAACCCCTTCGACTTCATGGAGAACATTTCGCTGGGCGGCAAGACCAACTTCTTCG 116828
Query 26300 AAAAGAGGGTCGGCGACTATCA 26321
| ||| | || ||||| || ||
Sbjct 116827 AGAAGCGTGTTGGCGAGTACCA 116806
>seq564
Length=57547
Score = 168 bits (186), Expect = 1e-36
Identities = 838/1315 (64%), Gaps = 47/1315 (4%)
Strand=Plus/Minus
Query 221371 GTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTCAGG-GCAGCGT 221429
||| | |||||| |||||| | || || | |||| || || ||| | ||||| |
Sbjct 7336 GTATGTCTCGTAAGGACCGAGCTTCTCAGCAAGCTCGCATGAA-GCCTCAAGAGCAGCAT 7278
Query 221430 GGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAAGGGCA 221489
| |||||||||||||| ||| ||||||| ||||||||| || || ||| ||||
Sbjct 7277 GATAGATGGTCTCAAAAATCTGGATGTTGAGCTCCTTGGCCTCAGGCGAGTCGAATGGCA 7218
Query 221490 TACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTC 221549
| || || | ||| | || || || || | || || | ||| ||||| | ||| |
Sbjct 7217 TGCGGAGAGCCAAGAAGGCATCAGCAAGACCGTTGACACCAAGACCAATGGGTCGGTGGC 7158
Query 221550 TCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGA 221609
|||| || ||||| || || || |||||| ||||| ||||| |
Sbjct 7157 GGAAGTTGCTCTTTCGTGCCTCTGGTACCGGGTAGTAGTTGATCTCGATGGTCTTGTTCA 7098
Query 221610 GGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAA---CT 221666
|||| | |||| ||||| |||||| || |||| | | || ||| ||
Sbjct 7097 GGTTACGTGTGACCACTTTGGTGACCTCGTGAAGTTTCTTGAAGTCAAAAACCTCGTTCT 7038
Query 221667 CGCCGCCGTCGTGGAGGGGTTCCACAA-AAGCGTTTAGGGCAACGCTGGCCAGGTTACAC 221725
|| | || ||| | ||| || | ||||| || ||||| || ||
Sbjct 7037 CGATGTCGACGTAGGTGGG---CAGAGCAAGCG--------AA-----GCCAGATTGCAG 6994
Query 221726 ACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTG 221785
|| || ||||| ||| | |||| |||||||| || || | || || ||||
Sbjct 6993 ACAGCGACCTCATCCGGAGCAGAGTACTCCATGATCTCAGTGCACAAATTAGAGCTCTTG 6934
Query 221786 ATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAG 221845
||||| || || | || || || |||||| ||||| ||||||||||| || || ||
Sbjct 6933 ATGGTGCCAAGATTCTTCTGGTTGCTCTTGCGGTTGGCGGCGTCCTTGTACAGAATGAAA 6874
Query 221846 GGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCAC 221904
|| ||| ||||| ||| ||| | ||||| | ||| | || |||| || | ||
Sbjct 6873 GGTGTGCCGGTCTCGGTCTGCGCCTCGAGAATAGCATACCATATTT-TCTGAGCACGAAC 6815
Query 221905 CGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCCGGTATAGAGCATGTCAAACTTTT 221963
|||| | || || | | ||| | ||||| | || ||| | |||| |
Sbjct 6814 CGTC----TCACGGCCCTTGCCTTCTCTCTCATAACGCTCGTACAGCTCCTTGAACTCGT 6759
Query 221964 CACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCA-GTGCTTG 222022
||||||| | || ||| || || || | ||| ||||| ||| |||| |||| |
Sbjct 6758 CACCGTAGACATCCGACAGACCAGGGCATTCGTTGGGGCACATTAGAGTCCAAGTGCC-G 6700
Query 222023 TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTG 222082
|| | || ||| | |||||| ||||| || || ||||| || || | || | ||| |
Sbjct 6699 TTCTGTTCGACACGCTGCATAAAGAGATCGGGAATCCAGAGAGCGTAGAACAAATCGCGC 6640
Query 222083 GTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCG 222142
| || || ||| || | ||| || | || |||| |||| | | ||| |||
Sbjct 6639 GCACGAACTTCTTCCTTTCCATGGTTCTTGCGAAGGTCCATGAACTGCATGACGTCTGCG 6580
Query 222143 TGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACC 222202
||||||||||| || |||| ||| | ||| || || ||||||||||||||||| | || |
Sbjct 6579 TGCCACGGCTCAAGGTAGATGGCAAAAGCACCTGGACGCTTGTTGCCACCCTGGT-CAAC 6521
Query 222203 ATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTT 222261
| | ||| | |||| ||| || || | ||||| || ||||||||| |||||
Sbjct 6520 GTAACGTGCAGTGTTGTTGTAGACTCGTAGCATTGGTACAAGACCGTTGGATGTGCCGTT 6461
Query 222262 GGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCCGATAC 222317
||||| |||||| | || ||||| | ||| || | ||| || ||||
Sbjct 6460 TGTGCCGCCAATGTATGAGCCTGTAGCCCTGATGTTGTGAACATGAAGA----CCAATAC 6405
Query 222318 CACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAG 222377
| || |||| || ||||||||||| || ||||||| ||||| ||| || || ||
Sbjct 6404 CGCCAGCGTTCTTGGAGATCATGGCACATATCTTGAGGGTGTCGTAGATACCATCAATGC 6345
Query 222378 AGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGT 222437
||| ||||| | | || || || || || | | ||| | | | || || ||
Sbjct 6344 TGTCATCCTTCATGGCCACCAAGAAGCAGGATGCTAGCTGCGCCTGTGGGGTACCAGCAC 6285
Query 222438 TAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTA 222497
| || || || || || ||||| ||||| | ||||| | ||| ||||| |
Sbjct 6284 TGAAAAGTGTTGGCGAAGCATGTGTGAAGTACTTCAACGACATGTAGTTGTATGTCTCGA 6225
Query 222498 CGACTCTGGCGATGTTGTCCCCGTGAAT-CTGCATGGCGCATCTCATGTACATGTACTGG 222556
|| | |||| ||||||||||| | | | | || | |||| ||| | ||
Sbjct 6224 TCGCTGCTTCAATGTCTTCCCCGTGAATGCCGACAGCCACA-CGCATGATCATCTGTTGC 6166
Query 222557 GGCCTCTCCACAGGACCCTTGGAGC--TGGAGAGCAGGTACGATTTTTCCAGAGTCTTGA 222614
|| ||||| || ||| | | | | ||| ||||| ||| |||||||||||||
Sbjct 6165 GGTCTCTCGGCA--ACCTTGCCATCAATTCTGAGAAGGTATGATCGCTCCAGAGTCTTGA 6108
Query 222615 ACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCGGCGTCCAGCTC 222669
| || ||||| | | || ||||| | | | | || | ||| | || ||||||
Sbjct 6107 AGCCGAAGTATTGGTAGTTGAAGTCGCGGTCATAGACAATGGCCGAGTTCAGCTC 6053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928803733449280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |