Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dothistroma_20septosporum_20[genbank_20GCA_5F002236565.1_202017-07-
28] 3,537 sequences; 43,616,279 total letters
Query= NC_019544.1
Length=49335
Score E
Sequences producing significant alignments: (Bits) Value
seq2217 264 4e-66
seq2873 87.8 6e-13
>seq2217
Length=1057156
Score = 264 bits (292), Expect = 4e-66
Identities = 509/748 (68%), Gaps = 2/748 (0%)
Strand=Plus/Minus
Query 45438 TGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGATC 45497
|||| | ||||| || || | || || ||| | || ||||||||| | || | ||| |
Sbjct 566893 TGAAGAACTATCTTGATTTATTACAGGATATCCTGGATAACGGCGTGCATAAGGGAGACC 566834
Query 45498 GGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACG 45557
| || ||||| || || || || || ||| | ||||| || | | || | || |
Sbjct 566833 GCACCGGAACGGGAACCCAATCTGTTTTTGGCAGACAGCTCCGATATGACCTATCCGAAG 566774
Query 45558 GATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCT 45617
| |||||||| || || || || | ||| | || ||||| |||| || | |
Sbjct 566773 GGTTCCCGCTTGTAACAACCAAGCGAATCCATCTGAAATCAGTCATTCATGAGTTGTTAT 566714
Query 45618 GGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGG 45677
||||||| | || ||||||||| | |||| || |||| ||||| |||| ||| ||||
Sbjct 566713 GGTTTTTGAGCGGGGATACGAATATATCCTATCTGAAGGAAAATGGCGTGAAGATCTGGG 566654
Query 45678 ACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGT 45737
| || ||||| || ||||| || ||| | || || | ||||| | |||||||| | |
Sbjct 566653 ATGATTGGGCTGACGAAAATGGTGATTTGGGTCCGGTATACGGATCTCAATGGCGCACTT 566594
Query 45738 GGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGC 45797
|| ||| | | || | | | | || || ||||| || || || | ||| ||
Sbjct 566593 GGGAAGCACCCAATGGAGAGAAGATTGATCAGATTGCAGCTGTAATTGATTCAATTAAAA 566534
Query 45798 GCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAA 45857
||| ||| | || || || || || ||||| ||||| ||||| || | | |
Sbjct 566533 ACAATCCGGATTCACGACGTCACCTCGTTAGCGCCTGGAATGTGGCGGAGATTAACAACA 566474
Query 45858 TGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCAT 45917
|||| ||||||| || |||| ||| |||||||||||||| || | || | ||||
Sbjct 566473 TGAAACTGCCCCCTTGCCATTTCGCGTTTCAGTTTTACGTGGCTGAGGGTAAACTATCAT 566414
Query 45918 GCATG-TGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGC 45976
| ||| | ||| |||||| || ||||| || || || |||| |||||||| || |||
Sbjct 566413 GTATGCTCACAAT-GCGTTCCGTGGATACGTTCCTGGGGCTGCCATTTAACATTGCCAGC 566355
Query 45977 TATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATT 46036
||||| |||||||||||||| ||||||| || || || || || || || || ||||
Sbjct 566354 TATGCATTGTTGACACATATGATTGCCCAGCAGTGTGATCTTGAAGTGGGAGAGTTCATC 566295
Query 46037 TTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTG 46096
| |||| || || || || | ||| ||| ||| ||||||||| |||| ||| ||
Sbjct 566294 TGGTCCGGTGGGGATGTACACATCTACTCAAACCATGTGGAACAAGTGAAAACCCAGTTG 566235
Query 46097 ACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCTTT 46156
||| || || | | |||| || || || ||||| || |||||| || || |||
Sbjct 566234 GAGCGTGAACCATACGCATTGCCTAAACTGGTCATCAAGCGTAAGCCGGATTCCATTTTT 566175
Query 46157 GACTATGAATACGAGGATTTTGAATTTG 46184
|| ||| | || |||||||| ||||
Sbjct 566174 GATTATACGTTTGAAGATTTTGAGTTTG 566147
>seq2873
Length=797338
Score = 87.8 bits (96), Expect = 6e-13
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 35790 GTCCCGATCATTGTCCTGGCACAACTGAACCGGGCAGTGGAGCAAAGGGCGGACAAACGC 35849
|| ||| | |||| | || | || |||| ||||| || |||||| | ||| |||||
Sbjct 54287 GTTCCGGTTATTGCCTTGTCTCAGCTGAGCCGGGGTGTAGAGCAACGTCAGGATAAACGT 54346
Query 35850 CCGACGATGGCAGACCTTCGAGAGTCGGGAAGCATCGAGCAAATTGCTGATTTGATTGCC 35909
|||| |||| ||| | || || |||||| ||||||||| |||||| | | ||
Sbjct 54347 CCGATGATGAGTGACTTGCGGGAATCGGGATCGATCGAGCAAGATGCTGACATCGTAGCG 54406
Query 35910 TTCCTGTACCGCGAGGACTATTACAATCGGGACGCTGAACAAACAGGAATCACAGAAATT 35969
||||||||||| || ||||| || || | ||| | || | | | || | || |||
Sbjct 54407 TTCCTGTACCGGGATGACTACTATAACCAGGAGACCGAGAAGAAAAACATTATCGAGATT 54466
Query 35970 ATTGTTGCCAAAAACCGTAACGG 35992
||| | |||||| | ||||| ||
Sbjct 54467 ATTATCGCCAAACAGCGTAATGG 54489
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157743774187418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |